RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 HERVK_113P63132 956 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ERVK-8P63133 956 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 IGLV3-21P80748 117 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 DLG1Q12959 904 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ADGRD1Q6QNK2 874 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 TEX9Q8N6V9 391 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 C7orf57Q8NEG2 295 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 HUS1BQ8NHY5 278 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 PAQR8Q8TEZ7 354 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 SPACA9Q96E40 222 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 NAPGQ99747 312 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ERVK-6Q9BXR3 956 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 POLDIP3Q9BY77 421 aaKnown RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 SLC6A15Q9H2J7 730 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 NMRAL1Q9HBL8 299 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 SH2D2AQ9NP31 389 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ZFP64Q9NPA5 681 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 MS4A12Q9NXJ0 267 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 BOKQ9UMX3 212 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ERVK-19Q9WJR5 959 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 DNAJC13O75165 2243 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 HIVEP1P15822 2718 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 FAM159BA6NKW6 160 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 OR10H2O60403 315 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SCELO95171 688 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CD99P14209 185 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 GABRA1P14867 456 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 EPB42P16452 691 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SERPINB3P29508 390 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SERPINB1P30740 379 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 UQCRC1P31930 480 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 GPX6P59796 221 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CBLBQ13191 982 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 BIKQ13323 160 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 E2F2Q14209 437 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SLMAPQ14BN4 828 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 GRTP1Q5TC63 336 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 GRHL2Q6ISB3 625 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SLC29A4Q7RTT9 530 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CMC1Q7Z7K0 106 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 TBC1D1Q86TI0 1168 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-205ENST00000587888 LIX1Q8N485 282 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 PPM1NQ8N819 430 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 OR10G3Q8NGC4 313 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 NXNL1Q96CM4 212 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 FBXL20Q96IG2 436 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 ART5Q96L15 291 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 LIME1Q9H400 295 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 PROK2Q9HC23 129 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CCM2LQ9NUG4 571 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-205ENST00000587888 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERCC1-205ENST00000587888 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 CNIH4Q9P003 139 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 PHF11Q9UIL8 331 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 ANGPTL3Q9Y5C1 460 aa13.03□□□□□ -0.32
ERCC1-205ENST00000587888 NCKAP5O14513 1909 aa13.02□□□□□ -0.32
ERCC1-205ENST00000587888 PLPP1O14494 284 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 PROM1O43490 865 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 CTAG2O75638 210 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 GPR75O95800 540 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 LTA4HP09960 611 aaKnown RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 SLC35E2BP0CK96 405 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 WNT3P56703 355 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 RPS13P62277 151 aaKnown RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 TNFRSF17Q02223 184 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 TBL3Q12788 808 aaKnown RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 KBTBD12Q3ZCT8 623 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 RIPPLY2Q5TAB7 128 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 TMEM64Q6YI46 380 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 CYS1Q717R9 158 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 FBXW8Q8N3Y1 598 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 RIT1Q92963 219 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 UCN3Q969E3 161 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 ATOH8Q96SQ7 321 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 GPATCH1Q9BRR8 931 aaKnown RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 ERP44Q9BS26 406 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 DOHHQ9BU89 302 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 ZNF703Q9H7S9 590 aaPredicted RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 IGSF5Q9NSI5 407 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 WHRNQ9P202 907 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 CHCHD2Q9Y6H1 151 aaPredicted RBP13.02□□□□□ -0.33
ERCC1-205ENST00000587888 CELSR1Q9NYQ6 3014 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.33
ERCC1-205ENST00000587888 C15orf38-AP3S2A0A0A6YYH1 394 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms