RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 CKAP4Q07065 602 aaKnown RBP17.35■□□□□ 0.37
TRIM47-205ENST00000587774 PCBP2Q15366 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRIM47-205ENST00000587774 CPSF6Q16630 551 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRIM47-205ENST00000587774 MPEG1Q2M385 716 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 TECRLQ5HYJ1 363 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 NDUFAF5Q5TEU4 345 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 KLC3Q6P597 504 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 PAOXQ6QHF9 649 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 RGS9BPQ6ZS82 235 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 FAM109AQ8N4B1 249 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 TMEM251Q8N6I4 163 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 C7orf57Q8NEG2 295 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 DOK4Q8TEW6 326 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 TANKQ92844 425 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 LRRC1Q9BTT6 524 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 ENKD1Q9H0I2 346 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 ACSS3Q9H6R3 686 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 IPPKQ9H8X2 491 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 PNPLA3Q9NST1 481 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 NINJ2Q9NZG7 142 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 RNF6Q9Y252 685 aa17.35■□□□□ 0.37
TRIM47-205ENST00000587774 A0A0A6YYD5 115 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 NPIPA2E9PIF3 369 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 NPIPA3F8WFD2 350 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 PROM1O43490 865 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 DYRK3O43781 588 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 NADKO95544 446 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 P04436 131 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 NR2F6P10588 404 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ALOX15P16050 662 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 TYK2P29597 1187 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 SSTR2P30874 369 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 TLX1P31314 330 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 BSGP35613 385 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ARFIP1P53367 373 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 HERVK_113P63132 956 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ERVK-8P63133 956 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 FOXO1Q12778 655 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 PIGGQ5H8A4 983 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 TMEM211Q6ICI0 200 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 MRM1Q6IN84 353 aaKnown RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ADGRD1Q6QNK2 874 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ST13P4Q8IZP2 240 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 PLD6Q8N2A8 252 aaKnown RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 WDR20Q8TBZ3 569 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 SLC22A8Q8TCC7 542 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 MED12Q93074 2177 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 REPS1Q96D71 796 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 RBM18Q96H35 190 aaKnown RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ART5Q96L15 291 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 SMC6Q96SB8 1091 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 SPOCK3Q9BQ16 436 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 CNPPD1Q9BV87 410 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ERVK-6Q9BXR3 956 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 IL1RL2Q9HB29 575 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 TUBA8Q9NY65 449 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ERVK-19Q9WJR5 959 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 RNF11Q9Y3C5 154 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 ASB4Q9Y574 426 aa17.34■□□□□ 0.37
TRIM47-205ENST00000587774 GLOD5A6NK44 160 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 FAM90A27PA6NNH2 459 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 WASHC1A8K0Z3 465 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 IGHG3P01860 377 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 CELA3AP09093 270 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 PTX3P26022 381 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 PHBP35232 272 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 PIK3CGP48736 1102 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 BIKQ13323 160 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 CUL3Q13618 768 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 SPRED3Q2MJR0 410 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 ZNF791Q3KP31 576 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 CYP20A1Q6UW02 462 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 LYPD8Q6UX82 237 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 MEX3BQ6ZN04 569 aaKnown RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 L3MBTL4Q8NA19 623 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 OR52B6Q8NGF0 335 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 OR5M9Q8NGP3 310 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 RND1Q92730 232 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 SPACA9Q96E40 222 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 C14orf79Q96F83 325 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 CDK15Q96Q40 435 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 GAL3ST4Q96RP7 486 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 TREX2Q9BQ50 279 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 VPS11Q9H270 941 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 DDX31Q9H8H2 851 aaKnown RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 SH2D2AQ9NP31 389 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 SEMA4BQ9NPR2 832 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 ZNF358Q9NW07 568 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 LYARQ9NX58 379 aaKnown RBP17.33■□□□□ 0.36
TRIM47-205ENST00000587774 TNFRSF10DQ9UBN6 386 aa17.33■□□□□ 0.36
TRIM47-205ENST00000587774 SPG11Q96JI7 2443 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 A0A1W2PR48 441 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 NKX2-6A6NCS4 301 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 OR14I1A6ND48 311 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 OR7A17O14581 309 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 OR10H2O60403 315 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 AIFM1O95831 613 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 GBAP04062 536 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 FAM58BPP0C7Q3 252 aa17.32■□□□□ 0.36
TRIM47-205ENST00000587774 CHRNB4P30926 498 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms