RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ALOX15P16050 662 aaPredicted RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 EPORP19235 508 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 CRABP2P29373 138 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 PIK3CBP42338 1070 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 DDX39BQ13838 428 aaKnown RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.384e-10■■■■■ 41.9
RDH13-209ENST00000587721 HSPB2Q16082 182 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ZNF791Q3KP31 576 aaPredicted RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 TBCELQ5QJ74 424 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 DEPDC1Q5TB30 811 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ARSKQ6UWY0 536 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 MYLK4Q86YV6 388 aaPredicted RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 ST13P4Q8IZP2 240 aaPredicted RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 TAGAPQ8N103 731 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ZCCHC7Q8N3Z6 543 aaKnown RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 FAM13CQ8NE31 585 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 PAQR8Q8TEZ7 354 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 NINJ1Q92982 152 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 CNPPD1Q9BV87 410 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 OR51B5Q9H339 312 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ALG9Q9H6U8 611 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 WDR41Q9HAD4 459 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 DNAJB12Q9NXW2 375 aaKnown RBP12.68□□□□□ -0.38
RDH13-209ENST00000587721 Q9UFV3 132 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 PCDHGA11Q9Y5H2 935 aa12.68□□□□□ -0.38
RDH13-209ENST00000587721 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 CXorf49A8MYA2 514 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 TP53I11O14683 189 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 KERAO60938 352 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 CELA3AP09093 270 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 PTX3P26022 381 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 DNAJA1P31689 397 aaKnown RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 KIR2DL3P43628 341 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 TNFRSF17Q02223 184 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 SLMAPQ14BN4 828 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 PRAMEF20Q5VT98 475 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 TMEM198Q66K66 360 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 RTL6Q6ICC9 239 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 GRHL2Q6ISB3 625 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 RNF111Q6ZNA4 994 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 ISCA2Q86U28 154 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 C9orf40Q8IXQ3 194 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 HUS1BQ8NHY5 278 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 UBTD2Q8WUN7 234 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 RIT1Q92963 219 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 PPWD1Q96BP3 646 aaKnown RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 GAL3ST4Q96RP7 486 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 ERP44Q9BS26 406 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 POLDIP3Q9BY77 421 aaKnown RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 ZNF703Q9H7S9 590 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 SEMA4BQ9NPR2 832 aaPredicted RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 LYARQ9NX58 379 aaKnown RBP12.67□□□□□ -0.38
RDH13-209ENST00000587721 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 CSMD2Q7Z408 3487 aa12.67□□□□□ -0.38
RDH13-209ENST00000587721 CCDC189A1A4V9 331 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 OR6C76A6NM76 312 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 DVL2O14641 736 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 NADKO95544 446 aaPredicted RBP12.66□□□□□ -0.38
RDH13-209ENST00000587721 GPR75O95800 540 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 LTA4HP09960 611 aaKnown RBP12.66□□□□□ -0.38
RDH13-209ENST00000587721 HERVK_113P63132 956 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 ERVK-8P63133 956 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 RPP38P78345 283 aaKnown RBP12.66□□□□□ -0.38
RDH13-209ENST00000587721 ZNF267Q14586 743 aaPredicted RBP12.66□□□□□ -0.38
RDH13-209ENST00000587721 SPRED3Q2MJR0 410 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 LIPJQ5W064 366 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 CYP20A1Q6UW02 462 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 LRRC25Q8N386 305 aaPredicted RBP12.66□□□□□ -0.38
RDH13-209ENST00000587721 TEX9Q8N6V9 391 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 PPM1NQ8N819 430 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 NEIL3Q8TAT5 605 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 FOXC2Q99958 501 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 ERVK-6Q9BXR3 956 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 DPH5Q9H2P9 285 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 ACTR8Q9H981 624 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 SH2D2AQ9NP31 389 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 ERVK-19Q9WJR5 959 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 TSC22D4Q9Y3Q8 395 aa12.66□□□□□ -0.38
RDH13-209ENST00000587721 C15orf38-AP3S2A0A0A6YYH1 394 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 FAM221AA4D161 298 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 ANKRD33BA6NCL7 494 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 SYT5O00445 386 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 PROM1O43490 865 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 UGDHO60701 494 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 CTAG2O75638 210 aa12.65□□□□□ -0.38
RDH13-209ENST00000587721 FBXO45P0C2W1 286 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms