RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TMTC4Q5T4D3 741 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 PPP4R4Q6NUP7 873 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 BHLHB9Q6PI77 547 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 TMEM64Q6YI46 380 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 PLXDC1Q8IUK5 500 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 EPHX4Q8IUS5 362 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 ARHGEF39Q8N4T4 335 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 HORMAD2Q8N7B1 307 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 DTWD2Q8NBA8 298 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 OR4K14Q8NGD5 310 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 OR5T3Q8NGG3 340 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 MAGED4Q96JG8 741 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 ZC3H10Q96K80 434 aaKnown RBP18.71■□□□□ 0.59
TRIM47-204ENST00000587339 FSCN3Q9NQT6 498 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 DNAAF2Q9NVR5 837 aaKnown RBP18.71■□□□□ 0.59
TRIM47-204ENST00000587339 ADPRHL2Q9NX46 363 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 FBXO4Q9UKT5 387 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 CACNA1EQ15878 2313 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 H0YJX3 145 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 SGK494L7N484 410 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 SOCS2O14508 198 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 CFIP05156 583 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 ARAFP10398 606 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 MYF5P13349 255 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 HSPA13P48723 471 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 GPLD1P80108 840 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 EEF1A2Q05639 463 aaKnown RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 HLA-BQ31612 363 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 FKBP9P1Q75LS8 142 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 CBR4Q8N4T8 237 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 Q8N9G6 341 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 NPLQ9BXD5 320 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 ASPSCR1Q9BZE9 553 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 CHRNA10Q9GZZ6 450 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 DNAJB9Q9UBS3 223 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 TNRC6BQ9UPQ9 1833 aaKnown RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 MYO15AQ9UKN7 3530 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 PDLIM1O00151 329 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 GCM2O75603 506 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 PRSS23O95084 383 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 ZNF23P17027 643 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 GABRA4P48169 554 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 XKP51811 444 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 CRYBA2P53672 197 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 FOLH1Q04609 750 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM107Q6UX40 140 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 SLC30A8Q8IWU4 369 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 LRRC25Q8N386 305 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 OR9A2Q8NGT5 310 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 OR9A4Q8NGU2 314 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 N4BP2L2Q92802 583 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-204ENST00000587339 MOAP1Q96BY2 351 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 SLC35G5Q96KT7 338 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 NTN4Q9HB63 628 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 IRAK4Q9NWZ3 460 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 CLCA2Q9UQC9 943 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 ANGPT4Q9Y264 503 aa18.7■□□□□ 0.58
TRIM47-204ENST00000587339 ZDBF2Q9HCK1 2354 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 GNGT2O14610 69 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 SUV39H1O43463 412 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 B4GAT1O43505 415 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 PRKAG1P54619 331 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 SKP1P63208 163 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 PRR5P85299 388 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 SHC2P98077 582 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 MED21Q13503 144 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 NR1D2Q14995 579 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 GPR19Q15760 415 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 NDUFA9Q16795 377 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 CYBRD1Q53TN4 286 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-204ENST00000587339 TLDC1Q6P9B6 456 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 VTCN1Q7Z7D3 282 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 ZDHHC21Q8IVQ6 265 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 CARFQ8N187 725 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 CA13Q8N1Q1 262 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 PACRGLQ8N7B6 248 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 TTC29Q8NA56 475 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-204ENST00000587339 SFXN5Q8TD22 340 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 SAP25Q8TEE9 199 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 TBC1D20Q96BZ9 403 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 TPD52L3Q96J77 140 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 HSH2DQ96JZ2 352 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 ZNF597Q96LX8 424 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 IL1RAPQ9NPH3 570 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 RAB26Q9ULW5 256 aa18.69■□□□□ 0.58
TRIM47-204ENST00000587339 HMGN4O00479 90 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 CYR61O00622 381 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 ACOX3O15254 700 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 RDH16O75452 317 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 FHP07954 510 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 MAGEA2P43356 314 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 USP53Q70EK8 1073 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 CCDC80Q76M96 950 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 KANSL1Q7Z3B3 1105 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 OR4N5Q8IXE1 308 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 RAB8BQ92930 207 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 COL26A1Q96A83 441 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 ELP4Q96EB1 424 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 ZNF285Q96NJ3 590 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms