RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	SYBU	Q9NX95	663 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	PDE10A	Q9Y233	779 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	EIF3L	Q9Y262	564 aa	Known RBP	13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	MRPS33	Q9Y291	106 aa	Known RBP	13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	ARID1A	O14497	2285 aa		13.55	□□□□□ -0.24
RANBP3-208	ENST00000587263	EXOC1L	A0A1B0GW35	172 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	ERICH4	A6NGS2	130 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	CASK	O14936	926 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	C8G	P07360	202 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	SMIM10L1	P0DMW3	83 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	ETS1	P14921	441 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	OPRM1	P35372	400 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PIGA	P37287	484 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	WNT3	P56703	355 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	KCNJ2	P63252	427 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	TBL3	Q12788	808 aa	Known RBP	13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PDIA2	Q13087	525 aa	Known RBP	13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	SP140	Q13342	867 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	CTBP1	Q13363	440 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	ARMC3	Q5W041	872 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZNF470	Q6ECI4	717 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PRUNE1	Q86TP1	453 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PHC2	Q8IXK0	858 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PM20D2	Q8IYS1	436 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	LRRC25	Q8N386	305 aa	Predicted RBP	13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	MORN4	Q8NDC4	146 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	OR8K3	Q8NH51	312 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	EPS8L3	Q8TE67	593 aa	Known RBP	13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	SREK1	Q8WXA9	508 aa	Known RBP	13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	KIAA1191	Q96A73	305 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	CHMP6	Q96FZ7	201 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	SMIM10	Q96HG1	83 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	NAT9	Q9BTE0	207 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	PARVB	Q9HBI1	364 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZFP64	Q9NPA5	681 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	SOX13	Q9UN79	622 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	CLDN16	Q9Y5I7	305 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	COMMD10	Q9Y6G5	202 aa		13.54	□□□□□ -0.24
RANBP3-208	ENST00000587263	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	SH3D21	A4FU49	640 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	TGFBR3L	H3BV60	316 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	IL18BP	O95998	194 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	IFNA16	P05015	189 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	CTSS	P25774	331 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	RGS4	P49798	205 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	RNF4	P78317	190 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	BASP1	P80723	227 aa	Known RBP	13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	CSHL1	Q14406	222 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	SLC22A10	Q63ZE4	541 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	NSUN5P2	Q63ZY6	315 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	SPNS2	Q8IVW8	549 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZNF595	Q8IYB9	648 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	ZBED8	Q8IZ13	594 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	OR14A16	Q8NHC5	309 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	FAR2	Q96K12	515 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	NPL	Q9BXD5	320 aa	Predicted RBP	13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	NSRP1	Q9H0G5	558 aa	Known RBP	13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	JKAMP	Q9P055	326 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	ADAMTS6	Q9UKP5	1117 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	TEX264	Q9Y6I9	313 aa		13.53	□□□□□ -0.24
RANBP3-208	ENST00000587263	PABPN1L	A6NDY0	278 aa	Known RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	KDM4E	B2RXH2	506 aa	Predicted RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	C4orf51	C9J302	202 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	SERPINA6	P08185	405 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	RFPL3S	P0C7P2	107 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	CHN1	P15882	459 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	HIST1H2AD	P20671	130 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	FPR1	P21462	350 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	STX2	P32856	288 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	MAGEA3	P43357	314 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	TRPC1	P48995	793 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	RAB38	P57729	211 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	THOC5	Q13769	683 aa	Known RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	TOR1AIP1	Q5JTV8	583 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	LGSN	Q5TDP6	509 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ZNF549	Q6P9A3	640 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ADGRD1	Q6QNK2	874 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	C3orf62	Q6ZUJ4	267 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ANKRD53	Q8N9V6	530 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ZNF473	Q8WTR7	871 aa	Known RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	SLC5A11	Q8WWX8	675 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	PYCR2	Q96C36	320 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	PERP	Q96FX8	193 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	HIST1H2AH	Q96KK5	128 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	CCL19	Q99731	98 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	HIST1H2AJ	Q99878	128 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	H2AFJ	Q9BTM1	129 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	RBM24	Q9BX46	236 aa	Known RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	OR8D2	Q9GZM6	311 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	SPNS1	Q9H2V7	528 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	KLHL31	Q9H511	634 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	NKIRAS1	Q9NYS0	192 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	TRMT6	Q9UJA5	497 aa	Known RBP	13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263	ZNF180	Q9UJW8	692 aa		13.52	□□□□□ -0.25
RANBP3-208	ENST00000587263		A0A088AWK7	358 aa		13.51	□□□□□ -0.25
RANBP3-208	ENST00000587263	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms