RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 SH2D2AQ9NP31 389 aa12.93□□□□□ -0.34
ATG4D-206ENST00000586863 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
ATG4D-206ENST00000586863 OPTCQ9UBM4 332 aa12.93□□□□□ -0.34
ATG4D-206ENST00000586863 FIGNL2A6NMB9 653 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 PLPP1O14494 284 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 AQP7O14520 342 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 BCKDKO14874 412 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 GSTA2P09210 222 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 LTA4HP09960 611 aaKnown RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 GLI4P10075 376 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 MTHFD2P13995 350 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 ENDOUP21128 410 aaKnown RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 SERPINB1P30740 379 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 PIGAP37287 484 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 PLTPP55058 493 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 HNRNPH2P55795 449 aaKnown RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 FOLH1Q04609 750 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 PCDH1Q08174 1060 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 SLAMF1Q13291 335 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 DEPDC1Q5TB30 811 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 OR4C11Q6IEV9 310 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 TBC1D1Q86TI0 1168 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 CCDC25Q86WR0 208 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 CENPLQ8N0S6 344 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 FBXL20Q96IG2 436 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 ZNF717Q9BY31 904 aaPredicted RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 RPF2Q9H7B2 306 aaKnown RBP12.92□□□□□ -0.34
ATG4D-206ENST00000586863 SPRR3Q9UBC9 169 aa12.92□□□□□ -0.34
ATG4D-206ENST00000586863 A0A0G2JNJ9 132 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 LRRC14BA6NHZ5 514 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 FOXO6A8MYZ6 492 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 HOXD4P09016 255 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 CRABP2P29373 138 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ADH7P40394 386 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 RAP1GDS1P52306 607 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 RPS13P62277 151 aaKnown RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 HERVK_113P63132 956 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ERVK-8P63133 956 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 IRF9Q00978 393 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 PLIN5Q00G26 463 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 TRADDQ15628 312 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 PRAMEF20Q5VT98 475 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ZDHHC24Q6UX98 284 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 B3GNT6Q6ZMB0 384 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 SPNS3Q6ZMD2 512 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 GPR180Q86V85 440 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ZCCHC7Q8N3Z6 543 aaKnown RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 MNS1Q8NEH6 495 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 OR10Q1Q8NGQ4 319 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 FBXO25Q8TCJ0 367 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 PAQR8Q8TEZ7 354 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 KCTD4Q8WVF5 259 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 RGMAQ96B86 450 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 SPACA9Q96E40 222 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 GAL3ST4Q96RP7 486 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 CNPPD1Q9BV87 410 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ERVK-6Q9BXR3 956 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 PROK2Q9HC23 129 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 Q9UFV3 132 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
ATG4D-206ENST00000586863 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.91□□□□□ -0.34
ATG4D-206ENST00000586863 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
ATG4D-206ENST00000586863 TRGV5A0A0B4J1U4 118 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 LRRC3CA6NJW4 275 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 WASHC1A8K0Z3 465 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 TMPRSS11DO60235 418 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 KLK8O60259 260 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 SUSD5O60279 629 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 EEDO75530 441 aaKnown RBP12.9□□□□□ -0.34
ATG4D-206ENST00000586863 LRATO95237 230 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 RFPL3SP0C7P2 107 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-206ENST00000586863 EPB42P16452 691 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 STX2P32856 288 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 PIK3CBP42338 1070 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 MAGEA4P43358 317 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 C1orf185Q5T7R7 199 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 LIX1LQ8IVB5 337 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 ST13P4Q8IZP2 240 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-206ENST00000586863 FBXW8Q8N3Y1 598 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 OR10G3Q8NGC4 313 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 TANKQ92844 425 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
ATG4D-206ENST00000586863 ZNF559Q9BR84 538 aa12.9□□□□□ -0.34
ATG4D-206ENST00000586863 LDAHQ9H6V9 325 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms