RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 VAC14Q08AM6 782 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 C2orf80Q0P641 193 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 C19orf57Q0VDD7 668 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 TRIM25Q14258 630 aaKnown RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 FXNQ16595 210 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 MUM1Q2TAK8 710 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 C1orf146Q5VVC0 180 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 OR52E8Q6IFG1 317 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 RHBDD2Q6NTF9 364 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ZFP1Q6P2D0 407 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ERICH5Q6P6B1 374 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 AAGABQ6PD74 315 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 MED25Q71SY5 747 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 PRSS41Q7RTY9 318 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 UBE3DQ7Z6J8 389 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 DTX1Q86Y01 620 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 TMEM151BQ8IW70 566 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 KRTCAP2Q8N6L1 136 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 UTP15Q8TED0 518 aaKnown RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 OR5P2Q8WZ92 322 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 N4BP2L2Q92802 583 aaPredicted RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 UTP4Q969X6 686 aaKnown RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 CRELD1Q96HD1 420 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 TEFMQ96QE5 360 aaKnown RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 PANX1Q96RD7 426 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 CDRT15Q96T59 188 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ZPBPQ9BS86 351 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ANKHQ9HCJ1 492 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 PRDM7Q9NQW5 492 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 SLC22A11Q9NSA0 550 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 CUTCQ9NTM9 273 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 ADA2Q9NZK5 511 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 CDC14AQ9UNH5 594 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 MRPS33Q9Y291 106 aaKnown RBP11.92□□□□□ -0.5
VMP1-202ENST00000585847 ZNF451Q9Y4E5 1061 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
VMP1-202ENST00000585847 URB1O60287 2271 aaKnown RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 SCN2AQ99250 2005 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TRBV5-3A0A0A0MS03 114 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 H0YIG0 161 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 PDPK1O15530 556 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 SOX30O94993 753 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 KRT75O95678 551 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 HTR1EP28566 365 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 RBMS1P29558 406 aaKnown RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 FRKP42685 505 aaPredicted RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 PLA2G16P53816 162 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 ARSFP54793 590 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 FADDQ13158 208 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 PGS1Q32NB8 556 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 DLEU7Q6UYE1 221 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 ZNF517Q6ZMY9 492 aaPredicted RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 COX15Q7KZN9 410 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 SERPINA11Q86U17 422 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 PTRH1Q86Y79 214 aaKnown RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 PDSS2Q86YH6 399 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TMEM126BQ8IUX1 230 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 SLC30A8Q8IWU4 369 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 AMER3Q8N944 861 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 FAM47BQ8NA70 645 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 OR52E4Q8NGH9 312 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 CLHC1Q8NHS4 586 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 PSMA8Q8TAA3 256 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TM4SF18Q96CE8 201 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 DPH2Q9BQC3 489 aaPredicted RBP11.91□□□□□ -0.5
VMP1-202ENST00000585847 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 ALG2Q9H553 416 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 LHX9Q9NQ69 397 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 SEMA3GQ9NS98 782 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TAS2R9Q9NYW1 312 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 MAGEL2Q9UJ55 1249 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 SRPK3Q9UPE1 567 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 ENTPD4Q9Y227 616 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 PCDHA9Q9Y5H5 950 aa11.91□□□□□ -0.5
VMP1-202ENST00000585847 TERTO14746 1132 aaKnown RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 DSCR3O14972 297 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 RRP8O43159 456 aaKnown RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 GALR3O60755 368 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 SCN2BO60939 215 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 CPNE3O75131 537 aaKnown RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 SH3BGRLO75368 114 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 BCAS2O75934 225 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 ZIC2O95409 532 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 NSA2O95478 260 aaKnown RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 ONECUT2O95948 504 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 ZNF888P0CJ79 500 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 PIM1P11309 404 aaPredicted RBP11.9□□□□□ -0.5
VMP1-202ENST00000585847 AVPR1BP47901 424 aa11.9□□□□□ -0.5
VMP1-202ENST00000585847 TNFRSF17Q02223 184 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms