RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 FBXL20Q96IG2 436 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 ERP44Q9BS26 406 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 RAB17Q9H0T7 212 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 TUBA8Q9NY65 449 aaPredicted RBP13.85□□□□□ -0.19
VAPA-209ENST00000585042 OPTCQ9UBM4 332 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 B4GALT7Q9UBV7 327 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 BOKQ9UMX3 212 aaPredicted RBP13.85□□□□□ -0.19
VAPA-209ENST00000585042 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
VAPA-209ENST00000585042 SPG11Q96JI7 2443 aa13.85□□□□□ -0.19
VAPA-209ENST00000585042 ATP6AP2A0A1C7CYW4 349 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 FAM221AA4D161 298 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 ANKRD33BA6NCL7 494 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 OR6C76A6NM76 312 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 G3V3Y1 287 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 FGF17O60258 216 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 ATP6AP2O75787 350 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 PIAS1O75925 651 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 PCNAP12004 261 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 EPB42P16452 691 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 PTX3P26022 381 aaPredicted RBP13.84□□□□□ -0.19
VAPA-209ENST00000585042 SERPINB3P29508 390 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 DNASE1L1P49184 302 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 KRTAP21-3Q3LHN1 58 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 C1orf185Q5T7R7 199 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 LIPJQ5W064 366 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 GRHL2Q6ISB3 625 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 ST13P4Q8IZP2 240 aaPredicted RBP13.84□□□□□ -0.19
VAPA-209ENST00000585042 LRRC25Q8N386 305 aaPredicted RBP13.84□□□□□ -0.19
VAPA-209ENST00000585042 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 NINJ1Q92982 152 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 SPACA9Q96E40 222 aaPredicted RBP13.84□□□□□ -0.19
VAPA-209ENST00000585042 ATOH8Q96SQ7 321 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 ZFP64Q9NPA5 681 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 SAYSD1Q9NPB0 183 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 EDARQ9UNE0 448 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 LIPGQ9Y5X9 500 aa13.84□□□□□ -0.19
VAPA-209ENST00000585042 A0A0G2JNJ9 132 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 HSPB2A8KAH6 182 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 SYCE1LA8MT33 242 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 RTCAO00442 366 aaKnown RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 PROM1O43490 865 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 UGDHO60701 494 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 KERAO60938 352 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 ZWINTO95229 277 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 NADKO95544 446 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 C1QAP02745 245 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 LTA4HP09960 611 aaKnown RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 FBXO45P0C2W1 286 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 ALOX15P16050 662 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 PIGAP37287 484 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 BUD31P41223 144 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 RAP1GDS1P52306 607 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 CAV1Q03135 178 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 FOLH1Q04609 750 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 MYBPHQ13203 477 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 NAB1Q13506 487 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 HSPB2Q16082 182 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 TBCELQ5QJ74 424 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 METTL2BQ6P1Q9 378 aaKnown RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 ADGRD1Q6QNK2 874 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 LYPD8Q6UX82 237 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 CAPN12Q6ZSI9 719 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 SLC29A4Q7RTT9 530 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 ZNF572Q7Z3I7 529 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 TBC1D1Q86TI0 1168 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 TMEM200AQ86VY9 491 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 C9orf40Q8IXQ3 194 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 FBXW8Q8N3Y1 598 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 RHEBL1Q8TAI7 183 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 REPS1Q96D71 796 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 OR51B5Q9H339 312 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 ALG9Q9H6U8 611 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 EXO5Q9H790 373 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 SEMA4BQ9NPR2 832 aaPredicted RBP13.83□□□□□ -0.2
VAPA-209ENST00000585042 Q9UFV3 132 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 IKBKGQ9Y6K9 419 aa13.83□□□□□ -0.2
VAPA-209ENST00000585042 CAPN14A8MX76 684 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 AHRRA9YTQ3 701 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 H0YIV9 168 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 SYT5O00445 386 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 GPR75O95800 540 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 CELA3AP09093 270 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 SLC35E2BP0CK96 405 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 DNAJA1P31689 397 aaKnown RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 ART1P52961 327 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 KCNJ2P63252 427 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 PHEXP78562 749 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 TNFRSF17Q02223 184 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 ID2Q02363 134 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 CUL3Q13618 768 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 SF3B4Q15427 424 aaKnown RBP eCLIP13.82□□□□□ -0.21e-9■■□□□ 13.9
VAPA-209ENST00000585042 MRM1Q6IN84 353 aaKnown RBP13.82□□□□□ -0.2
VAPA-209ENST00000585042 ARSKQ6UWY0 536 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
VAPA-209ENST00000585042 CTAGE3PQ8IX95 158 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms