RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PGRP06401 933 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 SNRPB2P08579 225 aaKnown RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 C8orf89P0DMQ9 161 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 LAMP1P11279 417 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 CPMP14384 443 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 PORP16435 677 aaPredicted RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 MPIP34949 423 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 FEN1P39748 380 aaKnown RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 PLIN5Q00G26 463 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 ID2Q02363 134 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 LRRC74AQ0VAA2 488 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 RCAN2Q14206 197 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 TGIF1Q15583 401 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 ZNF385BQ569K4 471 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 OR4F3Q6IEY1 312 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 FUNDC1Q8IVP5 155 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 LRRC25Q8N386 305 aaPredicted RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 ZNF248Q8NDW4 579 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 TSPEARQ8WU66 669 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 ERP27Q96DN0 273 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 SPDL1Q96EA4 605 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 CNRIP1Q96F85 164 aaPredicted RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 RBM18Q96H35 190 aaKnown RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 DGAT2Q96PD7 388 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 OR52E6Q96RD3 313 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 CCDC106Q9BWC9 280 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 NECTIN3Q9NQS3 549 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 FAM120CQ9NX05 1096 aaKnown RBP17.18■□□□□ 0.34
RFFL-211ENST00000584541 PCDHGA6Q9Y5G7 932 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
RFFL-211ENST00000584541 IGKV3D-11A0A0A0MRZ8 115 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 OR2W5A6NFC9 320 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 MYO1GB0I1T2 1018 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 TERTO14746 1132 aaKnown RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 SLC35E2P0CK97 266 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 DGKQP52824 942 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 MANFP55145 182 aaKnown RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 IGLV3-21P80748 117 aaPredicted RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 SSPNQ14714 243 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 TIGD2Q4W5G0 525 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 C6orf163Q5TEZ5 329 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 FAAH2Q6GMR7 532 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 FAM180BQ6P0A1 224 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 GK5Q6ZS86 529 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 MSANTD1Q6ZTZ1 278 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 ERMP1Q7Z2K6 904 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 ST13P4Q8IZP2 240 aaPredicted RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 NUDT8Q8WV74 236 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 KCNE4Q8WWG9 221 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 TSLPQ969D9 159 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 CIDECQ96AQ7 238 aaPredicted RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 VPS50Q96JG6 964 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 SLC25A23Q9BV35 468 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 RMND5AQ9H871 391 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 ACSS1Q9NUB1 689 aaPredicted RBP17.17■□□□□ 0.34
RFFL-211ENST00000584541 DKK4Q9UBT3 224 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 PCDHGB4Q9UN71 923 aa17.17■□□□□ 0.34
RFFL-211ENST00000584541 A0A1W2PRB8 838 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 TCRBV16S1A1N1A0A5B0 115 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 RNASET2O00584 256 aaKnown RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 ANGPT2O15123 496 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 DYRK3O43781 588 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 UMODP07911 640 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 TNNI3P19429 210 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 STT3AP46977 705 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 ZFP36L2P47974 494 aaKnown RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 NCBP2P52298 156 aaKnown RBP eCLIP17.16■□□□□ 0.34
RFFL-211ENST00000584541 FOXL2P58012 376 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 OR4D2P58180 307 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 CYLC2Q14093 348 aaPredicted RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 CEBPEQ15744 281 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 PRSS53Q2L4Q9 553 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 CCDC116Q8IYX3 515 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 RP9Q8TA86 221 aaKnown RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 SNIP1Q8TAD8 396 aaKnown RBP17.16■□□□□ 0.34
RFFL-211ENST00000584541 CMTM5Q96DZ9 223 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 ZNF681Q96N22 645 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 ADAP2Q9NPF8 381 aa17.16■□□□□ 0.34
RFFL-211ENST00000584541 MYOCOSA0A1B0GUC4 107 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 PRSS51A0A1B0GVH4 220 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 A0A1W2PP18 115 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 TGFBR3LH3BV60 316 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 ATP1B1P05026 303 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 LIFP15018 202 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 NT5EP21589 574 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 F8A1P23610 371 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 MMP11P24347 488 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 GPC1P35052 558 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 FRKP42685 505 aaPredicted RBP17.15■□□□□ 0.34
RFFL-211ENST00000584541 STX5Q13190 355 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 CLN3Q13286 438 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 MAPKAPK3Q16644 382 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 MPEG1Q2M385 716 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 ZNF750Q32MQ0 723 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 MMEL1Q495T6 779 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 VPS26BQ4G0F5 336 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 FAM91A1Q658Y4 838 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 TMEM205Q6UW68 189 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms