RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 UROSP10746 265 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 CD96P40200 585 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 GPR143P51810 404 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 OR1C1Q15619 314 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF766Q5HY98 468 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 CLEC6AQ6EIG7 209 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 SPINK14Q6IE38 97 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 RPUSD3Q6P087 351 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 LRIG3Q6UXM1 1119 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 HSDL2Q6YN16 418 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ZCCHC23Q6ZST2 131 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 CROCCP2Q86T23 111 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ST13P4Q8IZP2 240 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 HORMAD2Q8N7B1 307 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF321PQ8N8H1 164 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 GALNT11Q8NCW6 608 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 OR4K14Q8NGD5 310 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 DOK4Q8TEW6 326 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 ART5Q96L15 291 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 SIGLEC12Q96PQ1 595 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 TRMOQ9BU70 441 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 CNPPD1Q9BV87 410 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 FAIM2Q9BWQ8 316 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 LIN28AQ9H9Z2 209 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 TNFRSF12AQ9NP84 129 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 KLHL1Q9NR64 748 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 LRFN1Q9P244 771 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 MCM8Q9UJA3 840 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 PCDHA9Q9Y5H5 950 aa11.73□□□□□ -0.53
SMARCE1-218ENST00000582955 NBASA2RRP1 2371 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 C1orf226A1L170 272 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 SERTM1A2A2V5 107 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 AZIN1O14977 448 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 PRKNO60260 465 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 NPHS1O60500 1241 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ITGA10O75578 1167 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 RASAL1O95294 804 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 CHEK2O96017 543 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 CHRNGP07510 517 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 SLC35E2P0CK97 266 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 CD46P15529 392 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 GNLYP22749 145 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 TIA1P31483 386 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 CYB561P49447 251 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ERVK-8P63133 956 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF267Q14586 743 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 INAQ16352 499 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 C6orf163Q5TEZ5 329 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF468Q5VIY5 522 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 DGAT2L6Q6ZPD8 337 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 EXOC3L1Q86VI1 746 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 MMP21Q8N119 569 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 TMEM156Q8N614 296 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 MDS2Q8NDY4 140 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 CDC26Q8NHZ8 85 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 PPP1R14CQ8TAE6 165 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 GRHL3Q8TE85 626 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 RIT1Q92963 219 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 SENP5Q96HI0 755 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 FBXL20Q96IG2 436 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 EBPLQ9BY08 206 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 HES7Q9BYE0 225 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 EML4Q9HC35 981 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 RRAGDQ9NQL2 400 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 ERVK-19Q9WJR5 959 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 BAHCC1Q9P281 2608 aa11.72□□□□□ -0.53
SMARCE1-218ENST00000582955 A0A1W2PS29 197 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 WDR91A4D1P6 747 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 TCP11X1B4DZS4 312 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 HRKO00198 91 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 WWP2O00308 870 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 ERAL1O75616 437 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 OR2J2O76002 312 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 BPGMP07738 259 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 IL3P08700 152 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 NT5EP21589 574 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 UQCRFS1P47985 274 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 HLCSP50747 726 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 SSR4P51571 173 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 XKP51811 444 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 HK2P52789 917 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 TRA2BP62995 288 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 RNF4P78317 190 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 NR6A1Q15406 480 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 SPRED3Q2MJR0 410 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 ZNF750Q32MQ0 723 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 ARL13AQ5H913 290 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 NUDCD3Q8IVD9 361 aa11.71□□□□□ -0.53
SMARCE1-218ENST00000582955 ARMC10Q8N2F6 343 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms