RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	GRAMD2A	Q8IUY3	354 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	OR4N4	Q8N0Y3	316 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	PGBD5	Q8N414	524 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	C1orf131	Q8NDD1	294 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SPATA4	Q8NEY3	305 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	STEAP2	Q8NFT2	490 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	AEN	Q8WTP8	325 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	CFHR4	Q92496	578 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SYN2	Q92777	582 aa	Predicted RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC22A18	Q96BI1	424 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	USB1	Q9BQ65	265 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC1	Q9BTT6	524 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	HGH1	Q9BTY7	390 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TSGA10	Q9BZW7	698 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	C16orf95	Q9H693	158 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	PROK2	Q9HC23	129 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	PLSCR4	Q9NRQ2	329 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LANCL2	Q9NS86	450 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	STOX2	Q9P2F5	926 aa	Predicted RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	MYOT	Q9UBF9	498 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF69	Q9UC07	566 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	MCM8	Q9UJA3	840 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	FBXO9	Q9UK97	447 aa	Predicted RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	NUP50	Q9UKX7	468 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	PROCR	Q9UNN8	238 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TRAF3IP3	Q9Y228	551 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	RUVBL1	Q9Y265	456 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	DLGAP4	Q9Y2H0	992 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	COQ4	Q9Y3A0	265 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	TSC22D4	Q9Y3Q8	395 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	JRKL	Q9Y4A0	524 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	HYOU1	Q9Y4L1	999 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LSM4	Q9Y4Z0	139 aa	Known RBP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	FAT1	Q14517	4588 aa		4.34	□□□□□ -1.71
MSI2-216	ENST00000582772	LRP2	P98164	4655 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	DNAH5	Q8TE73	4624 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772		A0A0A6YYC8	382 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TRBV11-1	A0A0K0K1C0	115 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	OR2W5	A6NFC9	320 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ARHGAP42	A6NI28	874 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	OR2AG2	A6NM03	316 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ISM1	B1AKI9	464 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	SRRM5	B3KS81	715 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772		H0Y3Z8	333 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772		H0YL77	283 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772		I3L1I5	382 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	IFRD1	O00458	451 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	CETN3	O15182	167 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	FGF10	O15520	208 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	CDK2AP2	O75956	126 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	NSA2	O95478	260 aa	Known RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	GNA14	O95837	355 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	S1PR4	O95977	384 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PEX11B	O96011	259 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PRL	P01236	227 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	NR3C1	P04150	777 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	IFNW1	P05000	195 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	CYP1A2	P05177	515 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TUBB	P07437	444 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	FAM153B	P0C7A2	387 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ERVK-10	P10266	1014 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	IGLL1	P15814	213 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	DDX5	P17844	614 aa	Known RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PAM	P19021	973 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	GPD1	P21695	349 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	IL10	P22301	178 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	NR2F2	P24468	414 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	GDF1	P27539	372 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	RFC1	P35251	1148 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	MSX2	P35548	267 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PIGA	P37287	484 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TNNT3	P45378	269 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	MXI1	P50539	228 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PAPOLA	P51003	745 aa	Known RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	MMP16	P51512	607 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	NAGLU	P54802	743 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TRADD	Q15628	312 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TAB1	Q15750	504 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	SLC18A3	Q16572	532 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	KCTD19	Q17RG1	926 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	FAM153C	Q494X1	144 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF658B	Q4V348	819 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	BCL7A	Q4VC05	210 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ATP13A5	Q4VNC0	1218 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	LDLRAP1	Q5SW96	308 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ERMARD	Q5T6L9	678 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	MFSD4B	Q5TF39	518 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	MEI1	Q5TIA1	1274 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	SSX8	Q7RTT4	187 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	PRSS41	Q7RTY9	318 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	JAZF1	Q86VZ6	243 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	ZNF786	Q8N393	782 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	B3GNT7	Q8NFL0	401 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	TRIM58	Q8NG06	486 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	OR51Q1	Q8NH59	317 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	CLDND2	Q8NHS1	167 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	HM13	Q8TCT9	377 aa		4.33	□□□□□ -1.72
MSI2-216	ENST00000582772	HSD17B8	Q92506	261 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms