RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 C2orf74A8MZ97 194 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 TMEM229AB2RXF0 380 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 TNFRSF11BO00300 401 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 STATHP02808 62 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 UGT2B7P16662 529 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF10P21506 573 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 PIGAP37287 484 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 DAPP51397 102 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 TP53BP2Q13625 1128 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 GPR18Q14330 331 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 TNFAIP8L2Q6P589 184 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 GPR141Q7Z602 305 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF300Q96RE9 604 aaPredicted RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 NDUFAF4Q9P032 175 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 CPNE7Q9UBL6 633 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 P2RX2Q9UBL9 471 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 FBXW2Q9UKT8 454 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 KLHL20Q9Y2M5 609 aa21.43■■□□□ 1.02
CCDC47-204ENST00000582252 FAM32AQ9Y421 112 aaKnown RBP21.43■■□□□ 1.02
CCDC47-204ENST00000582252 SDK1Q7Z5N4 2213 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 SPTY2D1-AS1A0A0U1RR47 76 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 LAMTOR5O43504 91 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 DNAJB5O75953 348 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 BCHEP06276 602 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 THEGLP0DJG4 465 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 CTSEP14091 401 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 CD27P26842 260 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 CERS1P27544 350 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 PPP2R1BP30154 601 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 KHKP50053 298 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 GABARAPL2P60520 117 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 IL1RL1Q01638 556 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 RELAQ04206 551 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 SUZ12Q15022 739 aaKnown RBP21.42■■□□□ 1.02
CCDC47-204ENST00000582252 SLC48A1Q6P1K1 146 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 CYP4Z1Q86W10 505 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 ALDH16A1Q8IZ83 802 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 SLC22A18ASQ8N1D0 253 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 FLVCR1-AS1Q8TAF5 88 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF607Q96SK3 696 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 MACROD1Q9BQ69 325 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 ORAI3Q9BRQ5 295 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 RIBC2Q9H4K1 309 aa21.42■■□□□ 1.02
CCDC47-204ENST00000582252 A0A1W2PR48 441 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 OR6C74A6NCV1 312 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 C4orf51C9J302 202 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 VILLO15195 856 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ERAL1O75616 437 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 AIFM1O95831 613 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 POLR2CP19387 275 aaPredicted RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 CSNK2A2P19784 350 aaPredicted RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 EEF1B2P24534 225 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ELK4P28324 431 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 RAB8AP61006 207 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 SPIBQ01892 262 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 KCNC4Q03721 635 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ANKRD34AQ69YU3 496 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 FAHD1Q6P587 224 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF773Q6PK81 442 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 FIGLAQ6QHK4 219 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 VN1R4Q7Z5H5 301 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 RBM12BQ8IXT5 1001 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 CAMKVQ8NCB2 501 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 OR10G6Q8NH81 332 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 GIPC3Q8TF64 312 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 TMEM19Q96HH6 336 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 APOL4Q9BPW4 351 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ADNPQ9H2P0 1102 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 GPR27Q9NS67 375 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ZCCHC3Q9NUD5 404 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 EXD2Q9NVH0 621 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 PTTG2Q9NZH5 202 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 PHF11Q9UIL8 331 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ATG4BQ9Y4P1 393 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 PCDHGA8Q9Y5G5 932 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 MPIP34949 423 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 PEX19P40855 299 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 BUD31P41223 144 aaPredicted RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 UBE2IP63279 158 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 BTN3A2P78410 334 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 GNA13Q14344 377 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 C6orf141Q5SZD1 244 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 BROXQ5VW32 411 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 SZRD1Q7Z422 152 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 TAF8Q7Z7C8 310 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 GALNT5Q7Z7M9 940 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF655Q8N720 491 aaPredicted RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 OR56A1Q8NGH5 318 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 SLC38A5Q8WUX1 472 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 BARD1Q99728 777 aaKnown RBP21.41■■□□□ 1.02
CCDC47-204ENST00000582252 KLK4Q9Y5K2 254 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 LYVE1Q9Y5Y7 322 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 ZNF780BQ9Y6R6 833 aa21.41■■□□□ 1.02
CCDC47-204ENST00000582252 A8MVJ9 347 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 HMGN4O00479 90 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 PROM1O43490 865 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 IFNW1P05000 195 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 TFPTP0C1Z6 253 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 MAGP20916 626 aa21.4■■□□□ 1.02
CCDC47-204ENST00000582252 RPS26P62854 115 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms