RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MED16Q9Y2X0 877 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 PCDHA13Q9Y5I0 950 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CLCA3PQ9Y6N3 262 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 KMT2CQ8NEZ4 4911 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 A0A0G2JN53 185 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 C17orf105B2RV13 164 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 EIF3FO00303 357 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 CYR61O00622 381 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 PSMD3O43242 534 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TGM6O95932 706 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 ESR1P03372 595 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 GYPCP04921 128 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 IFNA16P05015 189 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 F7P08709 466 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 FBXO45P0C2W1 286 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 MPC1LP0DKB6 136 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 CPN1P15169 458 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 MAP2K3P46734 347 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 RAB38P57729 211 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TBL3Q12788 808 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 GAB1Q13480 694 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TCEAL1Q15170 157 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 STX1AQ16623 288 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 BBS9Q3SYG4 887 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 BEX5Q5H9J7 111 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TOR1AIP1Q5JTV8 583 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 AADACL2Q6P093 401 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 AGTRAPQ6RW13 159 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 UBE2R2Q712K3 238 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 LINC00523Q86TU6 105 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 DEPDC4Q8N2C3 294 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 MPP5Q8N3R9 675 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM47BQ8NA70 645 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM13CQ8NE31 585 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 OR5L2Q8NGL0 311 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 OR14A16Q8NHC5 309 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 SGMS2Q8NHU3 365 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 NUBPLQ8TB37 319 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 AKAP1Q92667 903 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 DAZLQ92904 295 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 ALKBH8Q96BT7 664 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 CTHRC1Q96CG8 243 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 ZMYND19Q96E35 227 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TRMT61AQ96FX7 289 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 QRFPRQ96P65 431 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 TNFRSF13CQ96RJ3 184 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 PCBD2Q9H0N5 130 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 EIF2B3Q9NR50 452 aaKnown RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 ADAMTS6Q9UKP5 1117 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 AMFRQ9UKV5 643 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 C15orf41Q9Y2V0 281 aa6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 MAGED1Q9Y5V3 778 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-217ENST00000580654 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ANKRD33BA6NCL7 494 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 GOLGA8KD6RF30 607 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 C16orf97H3BN30 126 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 GOLGA8TH3BQL2 631 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 HRKO00198 91 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ZBTB14O43829 449 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 OR10H2O60403 315 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 LMX1BO60663 402 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 CTNSO60931 367 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ACTL6AO96019 429 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 CGAP01215 116 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 IGHV4-31P0DP07 118 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 POU2F1P14859 743 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 NMBRP28336 390 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 AHRP35869 848 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 KIR2DL2P43627 348 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 SLC6A12P48065 614 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 CCR8P51685 355 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 BTN3A2P78410 334 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 CRADDP78560 199 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 LOXL1Q08397 574 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 NAE1Q13564 534 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 NTRK2Q16620 822 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM120AOSQ5T036 256 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 LIPNQ5VXI9 398 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 SBSNQ6UWP8 590 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 DGAT2L6Q6ZPD8 337 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 PIWIL4Q7Z3Z4 852 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 YRDCQ86U90 279 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 CAND1Q86VP6 1230 aaKnown RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ZNF595Q8IYB9 648 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 SLC15A4Q8N697 577 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM83FQ8NEG4 500 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 OR10H5Q8NGA6 315 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 GABPB2Q8TAK5 448 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 RAB3IL1Q8TBN0 382 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ATL1Q8WXF7 558 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 PYCR2Q96C36 320 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 PGM2Q96G03 612 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 PLPPR2Q96GM1 343 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ALOXE3Q9BYJ1 711 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 OSBPL8Q9BZF1 889 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
SMARCE1-217ENST00000580654 ETNK1Q9HBU6 452 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms