RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 ZNF780BQ9Y6R6 833 aa5.97□□□□□ -1.45
PPP4R1-217ENST00000580583 ATG2BQ96BY7 2078 aa5.97□□□□□ -1.45
PPP4R1-217ENST00000580583 LAMA2P24043 3122 aaKnown RBP5.96□□□□□ -1.45
PPP4R1-217ENST00000580583 FANCMQ8IYD8 2048 aa5.96□□□□□ -1.45
PPP4R1-217ENST00000580583 RANBP2P49792 3224 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 A0A0J9YVX5 310 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 EME2A4GXA9 379 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KRBA1A5PL33 1030 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 LILRA5A6NI73 299 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TRIM64CA6NLI5 447 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TMEM229AB2RXF0 380 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 M0QX08 132 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TNFRSF11BO00300 401 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 HMGN4O00479 90 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PGRMC2O15173 223 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SLC16A6O15403 523 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ZSCAN9O15535 394 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PROM1O43490 865 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ASNA1O43681 348 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 B3GALT2O43825 422 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 JRKO75564 520 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CSF2P04141 144 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TFPTP0C1Z6 253 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CYP4B1P13584 511 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PVRP15151 417 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 IL9P15248 144 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 JUNDP17535 347 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ALOX12P18054 663 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TNFRSF1BP20333 461 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CD247P20963 164 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CPN2P22792 545 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 MC3RP41968 323 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 XCR1P46094 333 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CAPZBP47756 277 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ALDH3B2P48448 385 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 HLCSP50747 726 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CDH15P55291 814 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SH3BGRP55822 239 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 STARD6P59095 220 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KCNC4Q03721 635 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 C1orf61Q13536 156 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 GNA13Q14344 377 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ELOCQ15369 112 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CEBPEQ15744 281 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CNPY1Q3B7I2 92 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 IQCCQ4KMZ1 466 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 DEFB134Q4QY38 66 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 RBM48Q5RL73 367 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ZNF691Q5VV52 312 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 C18orf63Q68DL7 685 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ANKRD34AQ69YU3 496 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KDM4DQ6B0I6 523 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 BORAQ6PGQ7 559 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ZNF773Q6PK81 442 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 FIGLAQ6QHK4 219 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TMEM107Q6UX40 140 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 RBM44Q6ZP01 1051 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 THAP5Q7Z6K1 395 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 IQCHQ86VS3 1027 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KRT73Q86Y46 540 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SLC44A2Q8IWA5 706 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SFTPA2Q8IWL1 248 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SAMD14Q8IZD0 417 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 LGI4Q8N135 537 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 LRRC25Q8N386 305 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CSNK1A1LQ8N752 337 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 FRMD1Q8N878 549 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 C19orf47Q8N9M1 422 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ATG16L2Q8NAA4 619 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PIK3C3Q8NEB9 887 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 FAM46DQ8NEK8 389 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CADM4Q8NFZ8 388 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 OR4C15Q8NGM1 316 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 BBS10Q8TAM1 723 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SUN3Q8TAQ9 357 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SLC38A5Q8WUX1 472 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 RASSF5Q8WWW0 418 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KLHL6Q8WZ60 621 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 HDAC2Q92769 488 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PROX1Q92786 737 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 RAB8BQ92930 207 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CNRIP1Q96F85 164 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SPACA7Q96KW9 195 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 MS4A4EQ96PG1 132 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ZNF300Q96RE9 604 aaPredicted RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 ZNF607Q96SK3 696 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 TSC22D3Q99576 134 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PITX2Q99697 317 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 BARD1Q99728 777 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 PIP5K1AQ99755 562 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 APOL4Q9BPW4 351 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 MAPKAP1Q9BPZ7 522 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 CCDC3Q9BQI4 270 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 GABARAPL3Q9BY60 117 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 KLHL25Q9H0H3 589 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 RBM38Q9H0Z9 239 aaKnown RBP5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 OR51I1Q9H343 314 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 SEMA6CQ9H3T2 930 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 LYRM4Q9HD34 91 aa5.96□□□□□ -1.46
PPP4R1-217ENST00000580583 VCX3AQ9NNX9 186 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms