RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ARNTP27540 789 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
GGA3-206ENST00000578773 SCTRP47872 440 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 SLC6A12P48065 614 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 PCYT1AP49585 367 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 LHX2P50458 406 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 CLCN7P51798 805 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 NUDT6P53370 316 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 HSD17B7P56937 341 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 RAB38P57729 211 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 RGS1Q08116 209 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 GAB1Q13480 694 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 ABHD17CQ6PCB6 329 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 BANPQ8N9N5 519 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 OR4K1Q8NGD4 311 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 OR5L2Q8NGL0 311 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 FIG4Q92562 907 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 GAL3ST4Q96RP7 486 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 KRTAP17-1Q9BYP8 105 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 CHRAC1Q9NRG0 131 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 TEX10Q9NXF1 929 aaPredicted RBP9.96□□□□□ -0.82
GGA3-206ENST00000578773 ELOVL5Q9NYP7 299 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 VTI1BQ9UEU0 232 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 ARFGEF3Q5TH69 2177 aa9.96□□□□□ -0.82
GGA3-206ENST00000578773 TMEM89A2RUT3 159 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 EIF3FO00303 357 aaPredicted RBP9.95□□□□□ -0.82
GGA3-206ENST00000578773 SPOPO43791 374 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 TMEM253P0C7T8 217 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 TNNI3P19429 210 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 CHRM3P20309 590 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 NMBRP28336 390 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 CLDN18P56856 261 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 NTRK2Q16620 822 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 CYP1B1Q16678 543 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 PARP6Q2NL67 630 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 AARS2Q5JTZ9 985 aaKnown RBP9.95□□□□□ -0.82
GGA3-206ENST00000578773 ADAM5Q6NVV9 412 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 AGTRAPQ6RW13 159 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 LCTLQ6UWM7 567 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 CES3Q6UWW8 571 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 STAC2Q6ZMT1 411 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 UBE2R2Q712K3 238 aaPredicted RBP9.95□□□□□ -0.82
GGA3-206ENST00000578773 TRIM42Q8IWZ5 723 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 FAM71DQ8N9W8 422 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ABHD11Q8NFV4 315 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 DAZLQ92904 295 aaKnown RBP9.95□□□□□ -0.82
GGA3-206ENST00000578773 CAVIN3Q969G5 261 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ZNF845Q96IR2 970 aaPredicted RBP9.95□□□□□ -0.82
GGA3-206ENST00000578773 TSNARE1Q96NA8 513 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 KRT12Q99456 494 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ZNF696Q9H7X3 374 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ZFP69BQ9UJL9 534 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 ANAPC5Q9UJX4 755 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 RIMKLBQ9ULI2 386 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 RNF115Q9Y4L5 304 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 PCDHGB1Q9Y5G3 927 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 IKBKGQ9Y6K9 419 aa9.95□□□□□ -0.82
GGA3-206ENST00000578773 H0YC42 278 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 FTCDO95954 541 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 ACTL6AO96019 429 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 CLPSP04118 112 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 IGKV3-11P04433 115 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 SAT1P21673 171 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 ADRA1DP25100 572 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 CERS1P27544 350 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 GRK3P35626 688 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 MASP1P48740 699 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 TPD52P55327 224 aaPredicted RBP9.94□□□□□ -0.82
GGA3-206ENST00000578773 SKP1P63208 163 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.82
GGA3-206ENST00000578773 FUT7Q11130 342 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 ZNF672Q499Z4 452 aaPredicted RBP9.94□□□□□ -0.82
GGA3-206ENST00000578773 CLEC2AQ6UVW9 174 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 LRRC6Q86X45 466 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 OR4N5Q8IXE1 308 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 KATNAL2Q8IYT4 538 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 PRR22Q8IZ63 422 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 OTUD6BQ8N6M0 293 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 NUBPLQ8TB37 319 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 SPPL2AQ8TCT8 520 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 C10orf105Q8TEF2 133 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 UCN3Q969E3 161 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 PPWD1Q96BP3 646 aaKnown RBP9.94□□□□□ -0.82
GGA3-206ENST00000578773 C11orf24Q96F05 449 aaPredicted RBP9.94□□□□□ -0.82
GGA3-206ENST00000578773 MRFAP1L1Q96HT8 127 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 PANX2Q96RD6 677 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 SLC39A3Q9BRY0 314 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 FAM129AQ9BZQ8 928 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 SERHLQ9NQF3 203 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 MOCS1Q9NZB8 636 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 PDE10AQ9Y233 779 aa9.94□□□□□ -0.82
GGA3-206ENST00000578773 BZW2Q9Y6E2 419 aaKnown RBP9.94□□□□□ -0.82
GGA3-206ENST00000578773 B4DXG7 233 aa9.93□□□□□ -0.82
GGA3-206ENST00000578773 PJA2O43164 708 aa9.93□□□□□ -0.82
GGA3-206ENST00000578773 PSTPIP1O43586 416 aa9.93□□□□□ -0.82
GGA3-206ENST00000578773 RAMP1O60894 148 aa9.93□□□□□ -0.82
GGA3-206ENST00000578773 TBX6O95947 436 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms