RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SLC45A3Q96JT2 553 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DGAT2Q96PD7 388 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 BBS4Q96RK4 519 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CCNL2Q96S94 520 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SH3BP4Q9P0V3 963 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ARL2BPQ9Y2Y0 163 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GPR45Q9Y5Y3 372 aa10.59□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DYTNA2CJ06 578 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 GLOD5A6NK44 160 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 NDUFAB1O14561 156 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TERTO14746 1132 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SLC22A2O15244 555 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PDPK1O15530 556 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TLX3O43711 291 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SLITRK5O94991 958 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 IFNA16P05015 189 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 IL6P05231 212 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CPMP14384 443 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PORP16435 677 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 MMP11P24347 488 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ADSLP30566 484 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 OTX2P32243 289 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 S100A3P33764 101 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 GALNSP34059 522 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 EIF2S3P41091 472 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 STT3AP46977 705 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 MRPL19P49406 292 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 XKP51811 444 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 KCNK10P57789 538 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 RHAGQ02094 409 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SF3A3Q12874 501 aaKnown RBP eCLIP10.58□□□□□ -0.722e-20■■■□□ 15.9
CDK5RAP3-210ENST00000578733 MAPRE2Q15555 327 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ANXA8L1Q5VT79 327 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CLNKQ7Z7G1 428 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SCUBE1Q8IWY4 988 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ST13P4Q8IZP2 240 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 LRRC25Q8N386 305 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 BCAS4Q8TDM0 211 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 DAZLQ92904 295 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TESCQ96BS2 214 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 EGLN2Q96KS0 407 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ART5Q96L15 291 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 MARK4Q96L34 752 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 BBC3Q96PG8 261 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ALOXE3Q9BYJ1 711 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 BHLHE41Q9C0J9 482 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ADAP2Q9NPF8 381 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SLC35C2Q9NQQ7 365 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 SDR39U1Q9NRG7 319 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TAS2R7Q9NYW3 318 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 HEY2Q9UBP5 337 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ATP6V1HQ9UI12 483 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PCDHGB4Q9UN71 923 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 COPG1Q9Y678 874 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 APC2O95996 2303 aa10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 URB1O60287 2271 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TCRBV16S1A1N1A0A5B0 115 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PGRMC2O15173 223 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 FGF17O60258 216 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CNOT3O75175 753 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PRKRAO75569 313 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 UMODP07911 640 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 MAOAP21397 527 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 KIR3DL1P43629 444 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 HNRNPFP52597 415 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 NME5P56597 212 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 OR4D2P58180 307 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 RPS18P62269 152 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 BTG2P78543 158 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 IGLV3-21P80748 117 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PDE7AQ13946 482 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TERF2Q15554 542 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ELAVL1Q15717 326 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 UGT8Q16880 541 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 PGS1Q32NB8 556 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TMEM205Q6UW68 189 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CCDC81Q6ZN84 652 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CPEB2Q7Z5Q1 589 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 VASH2Q86V25 355 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 RIMKLAQ8IXN7 391 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CCDC197Q8NCU1 140 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TMEM52Q8NDY8 209 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 OR14A16Q8NHC5 309 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 THAP4Q8WY91 577 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 ZBED6CLQ96FA7 236 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 UBL7Q96S82 380 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 LPAR4Q99677 370 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 TUBB6Q9BUF5 446 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 DUSP26Q9BV47 211 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 RMND5AQ9H871 391 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 FAM120CQ9NX05 1096 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 IL17BQ9UHF5 180 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 CES1P1Q9UKY3 287 aa10.57□□□□□ -0.72
CDK5RAP3-210ENST00000578733 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms