RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	SIGLEC12	Q96PQ1	595 aa		12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PELO	Q9BRX2	385 aa	Known RBP	12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MRPL1	Q9BYD6	325 aa	Known RBP	12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PLLP	Q9Y342	182 aa		12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	DOPEY1	Q5JWR5	2465 aa		12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ABCA12	Q86UK0	2595 aa		12.7	□□□□□ -0.38
CSNK1D-208	ENST00000578501	DYRK3	O43781	588 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	GUCY1B2	O75343	617 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PRKRA	O75569	313 aa	Known RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	RASAL1	O95294	804 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	AIFM1	O95831	613 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CLDN1	O95832	211 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CRYAB	P02511	175 aa	Known RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	GBA	P04062	536 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ALOX15	P16050	662 aa	Predicted RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	HMOX2	P30519	316 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	HLCS	P50747	726 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	NAGLU	P54802	743 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TRA2B	P62995	288 aa	Known RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ID2	Q02363	134 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OC90	Q02509	493 aa	Predicted RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CFAP157	Q5JU67	520 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	LIPM	Q5VYY2	423 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SPINK14	Q6IE38	97 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR52E8	Q6IFG1	317 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	HSDL2	Q6YN16	418 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	FRMD7	Q6ZUT3	714 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	COMMD6	Q7Z4G1	85 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR4N5	Q8IXE1	308 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CCNYL1	Q8N7R7	359 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	BANP	Q8N9N5	519 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CCDC63	Q8NA47	563 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TMEM178A	Q8NBL3	297 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SLC2A12	Q8TD20	617 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ZNF721	Q8TF20	911 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	CHTF18	Q8WVB6	975 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	APOPT1	Q96IL0	206 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TAAR6	Q96RI8	345 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SLX1A	Q9BQ83	275 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	RYDEN	Q9NUL5	291 aa	Known RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ANKRD10	Q9NXR5	420 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	LRFN1	Q9P244	771 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MYOT	Q9UBF9	498 aa		12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	YARS2	Q9Y2Z4	477 aa	Known RBP	12.69	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MYOCOS	A0A1B0GUC4	107 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ANKUB1	A6NFN9	424 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TMEM200C	A6NKL6	621 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	UBFD1	O14562	309 aa	Known RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PGRMC2	O15173	223 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ITGA10	O75578	1167 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	LDLR	P01130	860 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	IGKV3-11	P04433	115 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SP1	P08047	785 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SLC35E2	P0CK97	266 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MAPK12	P53778	367 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MRPL49	Q13405	166 aa	Known RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SPRED3	Q2MJR0	410 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TCHHL1	Q5QJ38	904 aa	Predicted RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	NDUFAF5	Q5TEU4	345 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	C1QL3	Q5VWW1	255 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	HOMEZ	Q8IX15	550 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	GPALPP1	Q8IXQ4	340 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR5L2	Q8NGL0	311 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	NR4A3	Q92570	626 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SENP5	Q96HI0	755 aa	Predicted RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	FBXL20	Q96IG2	436 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ART5	Q96L15	291 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	C5orf34	Q96MH7	638 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR8D2	Q9GZM6	311 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	IQCG	Q9H095	443 aa	Known RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	MID1IP1	Q9NPA3	183 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OLAH	Q9NV23	265 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TEX10	Q9NXF1	929 aa	Predicted RBP	12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	COPS7A	Q9UBW8	275 aa		12.68	□□□□□ -0.38
CSNK1D-208	ENST00000578501	C1orf226	A1L170	272 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ASPDH	A6ND91	283 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	GLOD5	A6NK44	160 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	WASHC1	A8K0Z3	465 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PRKN	O60260	465 aa	Predicted RBP	12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR10H2	O60403	315 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TRIM13	O60858	407 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SLC25A12	O75746	678 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PIK3R1	P27986	724 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	RNF4	P78317	190 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ASPH	Q12797	758 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ELOA	Q14241	798 aa	Known RBP	12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SPIN4	Q56A73	249 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	SLC25A25	Q6KCM7	469 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TRIM46	Q7Z4K8	759 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ZNF227	Q86WZ6	799 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TMEM156	Q8N614	296 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	C1orf52	Q8N6N3	182 aa	Known RBP	12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	ZNF321P	Q8N8H1	164 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	OR4K14	Q8NGD5	310 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	NUBPL	Q8TB37	319 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	THAP3	Q8WTV1	239 aa	Predicted RBP	12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	RIT1	Q92963	219 aa		12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	PPWD1	Q96BP3	646 aa	Known RBP	12.67	□□□□□ -0.38
CSNK1D-208	ENST00000578501	TM4SF18	Q96CE8	201 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms