RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FAIM2Q9BWQ8 316 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CLMPQ9H6B4 373 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 REEP4Q9H6H4 257 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 COPS7BQ9H9Q2 264 aaPredicted RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 SLC52A3Q9NQ40 469 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 IRAK4Q9NWZ3 460 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 DLL3Q9NYJ7 618 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 ATP6V1HQ9UI12 483 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PHF11Q9UIL8 331 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 EXO1Q9UQ84 846 aaKnown RBP7.56□□□□□ -1.2
COPS3-215ENST00000578317 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 ATG4BQ9Y4P1 393 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 PCDHGA8Q9Y5G5 932 aa7.56□□□□□ -1.2
COPS3-215ENST00000578317 CNOT1A5YKK6 2376 aaKnown RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 A0A0A6YYC8 382 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 A0A0G2JN53 185 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 A0A1B0GX78 115 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 A0A1W2PR48 441 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 C1orf226A1L170 272 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 FAM234BA2RU67 622 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 I3L1I5 382 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 EBAG9O00559 213 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 PLD2O14939 933 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 SCRG1O75711 98 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 GBAP04062 536 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 TP53P04637 393 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 FURINP09958 794 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 IL1RNP18510 177 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 CERS1P27544 350 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 PIK3R1P27986 724 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 IL12AP29459 219 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 TLX1P31314 330 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 RORAP35398 523 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 ZFP36L2P47974 494 aaKnown RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 KLC1Q07866 573 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 C2orf80Q0P641 193 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 TARDBPQ13148 414 aaKnown RBP eCLIP7.55□□□□□ -1.2
COPS3-215ENST00000578317 RCAN2Q14206 197 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 MAPRE2Q15555 327 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 COQ5Q5HYK3 327 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 DCAF12Q5T6F0 453 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 NDUFAF5Q5TEU4 345 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ZNF517Q6ZMY9 492 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 TTLL10Q6ZVT0 673 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 OR9A4Q8NGU2 314 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ZCCHC10Q8TBK6 192 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ADAMTS18Q8TE60 1221 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ERP27Q96DN0 273 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 FAM122AQ96E09 287 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 GBP5Q96PP8 586 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ZBTB18Q99592 522 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 EBPLQ9BY08 206 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 SPRY4Q9C004 299 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ACTR5Q9H9F9 607 aaPredicted RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 APMAPQ9HDC9 416 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 SLC39A1Q9NY26 324 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 ARMCX1Q9P291 453 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 CES1P1Q9UKY3 287 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 PSME2Q9UL46 239 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
COPS3-215ENST00000578317 PCDHA9Q9Y5H5 950 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 CAPN7Q9Y6W3 813 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 SPACA6W5XKT8 324 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 HEATR5BQ9P2D3 2071 aa7.55□□□□□ -1.2
COPS3-215ENST00000578317 KNTC1P50748 2209 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 IGLV3-12A0A075B6K2 115 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 A0A1W2PNU3 283 aaPredicted RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 A0A1W2PP18 115 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SGK494L7N484 410 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SCAMP2O15127 329 aaKnown RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 CHST10O43529 356 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 DNAJB6O75190 326 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 WISP1O95388 367 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TIAF1O95411 115 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SNRPB2P08579 225 aaKnown RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 IL3P08700 152 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 JMJD7P0C870 316 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 PIM1P11309 404 aaPredicted RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 MNAT1P51948 309 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 POLR2JP52435 117 aaKnown RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 HNRNPH2P55795 449 aaKnown RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 DCDP81605 110 aaKnown RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 ABHD18Q0P651 414 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 LRRC74AQ0VAA2 488 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 STX5Q13190 355 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 BIKQ13323 160 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 CEBPEQ15744 281 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 UGT8Q16880 541 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 C21orf62-AS1Q17RA5 79 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 AGKQ53H12 422 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 PRAMEF17Q5VTA0 474 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 MSANTD1Q6ZTZ1 278 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 PRSS41Q7RTY9 318 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 TMEM126BQ8IUX1 230 aa7.54□□□□□ -1.2
COPS3-215ENST00000578317 SAMD14Q8IZD0 417 aaPredicted RBP7.54□□□□□ -1.2
COPS3-215ENST00000578317 CA13Q8N1Q1 262 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms