RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 NCK1P16333 377 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 FEN1P39748 380 aaKnown RBP17.48■□□□□ 0.39
PRKCA-203ENST00000578063 POLE2P56282 527 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 SAXO2Q658L1 398 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 LRRC25Q8N386 305 aaPredicted RBP17.48■□□□□ 0.39
PRKCA-203ENST00000578063 OR5AK3PQ8NH89 298 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 SFXN5Q8TD22 340 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 MOAP1Q96BY2 351 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 NEURL3Q96EH8 262 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 NSMCE2Q96MF7 247 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 CHST8Q9H2A9 424 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 EPS8L2Q9H6S3 715 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 GORASP2Q9H8Y8 452 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 ANGPTL2Q9UKU9 493 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 MRPS33Q9Y291 106 aaKnown RBP17.48■□□□□ 0.39
PRKCA-203ENST00000578063 WDFY4Q6ZS81 3184 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 VPS13AQ96RL7 3174 aa17.48■□□□□ 0.39
PRKCA-203ENST00000578063 D6RAR5 112 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 C1QCP02747 245 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 C8orf89P0DMQ9 161 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 PPP2R1BP30154 601 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 SOX11P35716 441 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 GCGRP47871 477 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 MVDP53602 400 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 ARSFP54793 590 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 SF3A2Q15428 464 aaKnown RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 SPPL2CQ8IUH8 684 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 CCDC116Q8IYX3 515 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 MMABQ96EY8 250 aaPredicted RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 DUS3LQ96G46 650 aaKnown RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 NDC1Q9BTX1 674 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 HCN3Q9P1Z3 774 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 NKX1-2Q9UD57 310 aaPredicted RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 COL5A1P20908 1838 aaPredicted RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 CXCR6O00574 342 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 KCNK5O95279 499 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 CRATP43155 626 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 CCT3P49368 545 aaKnown RBP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 XKP51811 444 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 TRA2AQ13595 282 aaKnown RBP eCLIP17.47■□□□□ 0.39
PRKCA-203ENST00000578063 VMACQ2NL98 169 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 BHLHB9Q6PI77 547 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 SLITRK4Q8IW52 837 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 ZZZ3Q8IYH5 903 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 OR52E4Q8NGH9 312 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 FIG4Q92562 907 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 EDEM2Q9BV94 578 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 GPATCH2Q9NW75 528 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 CDC14AQ9UNH5 594 aa17.47■□□□□ 0.39
PRKCA-203ENST00000578063 H3BNX3 289 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 CDX4O14627 284 aaPredicted RBP17.46■□□□□ 0.39
PRKCA-203ENST00000578063 GPR75O95800 540 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 GPIP06744 558 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 CPMP14384 443 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 ANPEPP15144 967 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 FOLH1Q04609 750 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 DUSP2Q05923 314 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 ZNF750Q32MQ0 723 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 IRAK1BP1Q5VVH5 260 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 TTLL10Q6ZVT0 673 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 RNF130Q86XS8 419 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 PTOV1Q86YD1 416 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 ZNF595Q8IYB9 648 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 POP5Q969H6 163 aaKnown RBP17.46■□□□□ 0.39
PRKCA-203ENST00000578063 NCLNQ969V3 563 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 SRPK3Q9UPE1 567 aa17.46■□□□□ 0.39
PRKCA-203ENST00000578063 GPR179Q6PRD1 2367 aa17.46■□□□□ 0.38
PRKCA-203ENST00000578063 UNC13CQ8NB66 2214 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 SCN3AQ9NY46 2000 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 DHRS12A0PJE2 317 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 ZNF749O43361 778 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 FGF17O60258 216 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 UMPSP11172 480 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 PORP16435 677 aaPredicted RBP17.45■□□□□ 0.38
PRKCA-203ENST00000578063 PSMA4P25789 261 aaKnown RBP17.45■□□□□ 0.38
PRKCA-203ENST00000578063 SLC7A1P30825 629 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 MAGEA8P43361 318 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 PRR5P85299 388 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 SLC34A1Q06495 639 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 RBBP4Q09028 425 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 COL9A2Q14055 689 aaPredicted RBP17.45■□□□□ 0.38
PRKCA-203ENST00000578063 VEZF1Q14119 521 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 GCNT6Q5T4J0 391 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 RCBTB1Q8NDN9 531 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 TMEM52Q8NDY8 209 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 PRSS33Q8NF86 280 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 OR56A1Q8NGH5 318 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 OR9A2Q8NGT5 310 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 LRFN3Q9BTN0 628 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 TMEM38AQ9H6F2 299 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 TMEM9BQ9NQ34 198 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 ZCCHC3Q9NUD5 404 aaKnown RBP17.45■□□□□ 0.38
PRKCA-203ENST00000578063 STOML1Q9UBI4 398 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 RAPGEFL1Q9UHV5 662 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 FAF1Q9UNN5 650 aaPredicted RBP17.45■□□□□ 0.38
PRKCA-203ENST00000578063 MAP4K5Q9Y4K4 846 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 FRYLO94915 3013 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 ADAMTS20P59510 1910 aa17.45■□□□□ 0.38
PRKCA-203ENST00000578063 A0A1W2PS29 197 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms