RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ST13P4Q8IZP2 240 aaPredicted RBP20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 SLC2A12Q8TD20 617 aa20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 TM4SF18Q96CE8 201 aa20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 RBM18Q96H35 190 aaKnown RBP20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 OR8D2Q9GZM6 311 aa20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 RRAGDQ9NQL2 400 aaPredicted RBP20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 PCDHA9Q9Y5H5 950 aa20.67■□□□□ 0.9
SMARCD2-206ENST00000577990 SPTBN1Q01082 2364 aaKnown RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 TRAV17A0A0B4J275 112 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 GABRR3A8MPY1 467 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 PGRMC2O15173 223 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 DYRK3O43781 588 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 DDAH2O95865 285 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 SERPINB5P36952 375 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 SERPINB4P48594 390 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 MLF1P58340 268 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 RAE1P78406 368 aaKnown RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 BTKQ06187 659 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 PRR30Q53SZ7 412 aaPredicted RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 ARL13AQ5H913 290 aaPredicted RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 SPDYAQ5MJ70 313 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 OR1N1Q8NGS0 311 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 PPWD1Q96BP3 646 aaKnown RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 FAIM2Q9BWQ8 316 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 EML4Q9HC35 981 aaKnown RBP20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 FIS1Q9Y3D6 152 aa20.66■□□□□ 0.9
SMARCD2-206ENST00000577990 ESPL1Q14674 2120 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 C1orf226A1L170 272 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 OR10H2O60403 315 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 ZFAND5O76080 213 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 ZWINTO95229 277 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 PIK3R1P27986 724 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 TIA1P31483 386 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 UQCRFS1P47985 274 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 TUBA3CQ13748 450 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 KANK2Q63ZY3 851 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 GALNT18Q6P9A2 607 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 TUBA3EQ6PEY2 450 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 DGAT2L6Q6ZPD8 337 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 NUDCD3Q8IVD9 361 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 HOMEZQ8IX15 550 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 ARMC10Q8N2F6 343 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 C11orf24Q96F05 449 aaPredicted RBP20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 PKNOX2Q96KN3 472 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 UTP23Q9BRU9 249 aaKnown RBP20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 KCNK9Q9NPC2 374 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 SIRT5Q9NXA8 310 aa20.65■□□□□ 0.9
SMARCD2-206ENST00000577990 GNG14A0A1W2PPG7 69 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 GOLGA6L10A6NI86 522 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 CDK2AP1O14519 115 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 RSL1D1O76021 490 aaKnown RBP20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 CHEK2O96017 543 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SLC35E2P0CK97 266 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SRSF1Q07955 248 aaKnown RBP eCLIP20.64■□□□□ 0.892e-6■□□□□ 8.5
SMARCD2-206ENST00000577990 CASP8Q14790 479 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SLC48A1Q6P1K1 146 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 HSDL2Q6YN16 418 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 RNF165Q6ZSG1 346 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 ATCAYQ86WG3 371 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 MMP21Q8N119 569 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 CISD2Q8N5K1 135 aaKnown RBP20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 ZNF321PQ8N8H1 164 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 OR4K14Q8NGD5 310 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 OR6Y1Q8NGX8 325 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SUN3Q8TAQ9 357 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 ZNF721Q8TF20 911 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 THAP3Q8WTV1 239 aaPredicted RBP20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SNRNP40Q96DI7 357 aaKnown RBP20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 ART5Q96L15 291 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 MAP10Q9P2G4 905 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 COPS7AQ9UBW8 275 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 CES1P1Q9UKY3 287 aa20.64■□□□□ 0.89
SMARCD2-206ENST00000577990 SLC28A1O00337 649 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 FCHO1O14526 889 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 BIRC5O15392 142 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 PRKNO60260 465 aaPredicted RBP20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 FGF4P08620 206 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 DHRS4L1P0CG22 281 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 GALNSP34059 522 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 CD96P40200 585 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 ST13P50502 369 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 UBAP2LQ14157 1087 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 MPP2Q14168 576 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 SPRED3Q2MJR0 410 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 RPUSD3Q6P087 351 aaKnown RBP20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 CLYBLQ8N0X4 340 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 PPP1R14CQ8TAE6 165 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 SENP5Q96HI0 755 aaPredicted RBP20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 FBXL20Q96IG2 436 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 EBPLQ9BY08 206 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 TMBIM4Q9HC24 238 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 ANKRD10Q9NXR5 420 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 DLGAP4Q9Y2H0 992 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 TRAF6Q9Y4K3 522 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 CCL27Q9Y4X3 112 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 PTGDR2Q9Y5Y4 395 aa20.63■□□□□ 0.89
SMARCD2-206ENST00000577990 HIVEP3Q5T1R4 2406 aa20.62■□□□□ 0.89
SMARCD2-206ENST00000577990 A0A1W2PS29 197 aa20.62■□□□□ 0.89
SMARCD2-206ENST00000577990 WDR91A4D1P6 747 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms