RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ARFIP2P53365 341 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 CLNS1AP54105 237 aaKnown RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 PLIN5Q00G26 463 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 C2orf80Q0P641 193 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 ELAVL1Q15717 326 aaKnown RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 ZNF385BQ569K4 471 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 MFSD4BQ5TF39 518 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 NXNQ6DKJ4 435 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 SPATA21Q7Z572 469 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 TICAM1Q8IUC6 712 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 NATD1Q8N6N6 113 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 CLHC1Q8NHS4 586 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 SUN3Q8TAQ9 357 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 COQ8BQ96D53 544 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 THOC1Q96FV9 657 aaKnown RBP11.89□□□□□ -0.51
MKS1-206ENST00000577824 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 MESP1Q9BRJ9 268 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 EPN3Q9H201 632 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 SLC35C2Q9NQQ7 365 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 MRGBPQ9NV56 204 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 C5AR2Q9P296 337 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 TRIM33Q9UPN9 1127 aa11.89□□□□□ -0.51
MKS1-206ENST00000577824 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 A0A1W2PS29 197 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 WASHC1A8K0Z3 465 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 MYO1GB0I1T2 1018 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 SLITRK5O94991 958 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 HPP00738 406 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 CPMP14384 443 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 PIK3R1P27986 724 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 OTX2P32243 289 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ZFP36L2P47974 494 aaKnown RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 ALDH9A1P49189 494 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 STX4Q12846 297 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 MLC1Q15049 377 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 PRSS53Q2L4Q9 553 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 CCDC81Q6ZN84 652 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 RIPOR1Q6ZS17 1223 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 LRRC25Q8N386 305 aaPredicted RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 KRTCAP2Q8N6L1 136 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 GLB1L3Q8NCI6 653 aaPredicted RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 OR8J2Q8NGG1 315 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 CDC26Q8NHZ8 85 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ZNF675Q8TD23 568 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 C8orf44Q96CB5 159 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 PPCDCQ96CD2 204 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 TEX37Q96LM6 180 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 IMMP1LQ96LU5 166 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ALOXE3Q9BYJ1 711 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 BHLHE41Q9C0J9 482 aaPredicted RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 SLAMF7Q9NQ25 335 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 ACSS1Q9NUB1 689 aaPredicted RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 COPG1Q9Y678 874 aaKnown RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 ZNF780BQ9Y6R6 833 aa11.88□□□□□ -0.51
MKS1-206ENST00000577824 SPENQ96T58 3664 aaKnown RBP11.88□□□□□ -0.51
MKS1-206ENST00000577824 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 NKX2-8O15522 239 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PDPK1O15530 556 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 LRATO95237 230 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 FAM107AO95990 144 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PORP16435 677 aaPredicted RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 GPX3P22352 226 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 ITPKBP27987 946 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 SOX18P35713 384 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 XKP51811 444 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 OR4D2P58180 307 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 DUSP2Q05923 314 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 RCAN2Q14206 197 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 SQLEQ14534 574 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 SFT2D3Q587I9 215 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PLAG1Q6DJT9 500 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PAPD4Q6PIY7 484 aaKnown RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 NDUFAF7Q7L592 441 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PIGWQ7Z7B1 504 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 OR4N5Q8IXE1 308 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 MIER2Q8N344 545 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 CPSF7Q8N684 471 aaKnown RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 ZSCAN1Q8NBB4 408 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 OR7A2PQ8NGA2 310 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 OR14A16Q8NHC5 309 aa11.87□□□□□ -0.51
MKS1-206ENST00000577824 PTPMT1Q8WUK0 201 aaPredicted RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
MKS1-206ENST00000577824 CTHRC1Q96CG8 243 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms