RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 BARX1Q9HBU1 254 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 INTS10Q9NVR2 710 aaKnown RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 ELOVL5Q9NYP7 299 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 GALPQ9UBC7 116 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 VTI1BQ9UEU0 232 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 AMFRQ9UKV5 643 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 MAPRE3Q9UPY8 281 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 LAMP3Q9UQV4 416 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 PPP2R2CQ9Y2T4 447 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 C15orf41Q9Y2V0 281 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 CLDN16Q9Y5I7 305 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 MAD1L1Q9Y6D9 718 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ZNF407Q9C0G0 2248 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 UQCRHLA0A096LP55 91 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 A0A1W2PNV4 684 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CTAGE9A4FU28 777 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ANKRD33BA6NCL7 494 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 GOLGA8KD6RF30 607 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 GOLGA8TH3BQL2 631 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TGFBR3LH3BV60 316 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ERI3O43414 337 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 CTNSO60931 367 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CDH16O75309 829 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 LRATO95237 230 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ACSL3O95573 720 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 IFNB1P01574 187 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CRHP06850 196 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 APRTP07741 180 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 FBXO45P0C2W1 286 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SMIM10L1P0DMW3 83 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CPN1P15169 458 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 NPPBP16860 134 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 GSTM2P28161 218 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 NMBRP28336 390 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RPL22P35268 128 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 ACVR1BP36896 505 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SLCO1A2P46721 670 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RGS4P49798 205 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 HNRNPFP52597 415 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 NAP1L1P55209 391 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 SESN2P58004 480 aaPredicted RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 SRYQ05066 204 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CTBP1Q13363 440 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RBBP5Q15291 538 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 RPS6KA2Q15349 733 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 NTRK2Q16620 822 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TMEM249Q2WGJ8 235 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 EIPR1Q53HC9 387 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 DUPD1Q68J44 220 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 UGT3A1Q6NUS8 523 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CASC4Q6P4E1 433 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TRIM40Q6P9F5 258 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 MBOAT1Q6ZNC8 495 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ZNF550Q7Z398 422 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 PIWIL4Q7Z3Z4 852 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 TMPRSS11BQ86T26 416 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CILP2Q8IUL8 1156 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 C9orf40Q8IXQ3 194 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CPNE9Q8IYJ1 553 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TAGAPQ8N103 731 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 MYO1HQ8N1T3 1032 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ZNF321PQ8N8H1 164 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CNEP1R1Q8N9A8 125 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TMEM52Q8NDY8 209 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TRIM58Q8NG06 486 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 GIMAP7Q8NHV1 300 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 KIF18AQ8NI77 898 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CD200R1Q8TD46 325 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SLC44A1Q8WWI5 657 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ATL1Q8WXF7 558 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CCT6BQ92526 530 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ANKRD9Q96BM1 317 aaPredicted RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 DTNBP1Q96EV8 351 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SMIM10Q96HG1 83 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 MARK4Q96L34 752 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 HS6ST2Q96MM7 605 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RILPQ96NA2 401 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 DGAT2Q96PD7 388 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 UCN2Q96RP3 112 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 TUBA1CQ9BQE3 449 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RHNO1Q9BSD3 238 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SLCO5A1Q9H2Y9 848 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 PARVBQ9HBI1 364 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 ETNK1Q9HBU6 452 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 RAB6BQ9NRW1 208 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 BFARQ9NZS9 450 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 CLCF1Q9UBD9 225 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 PTBP2Q9UKA9 531 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 CNOT11Q9UKZ1 510 aaKnown RBP5.36□□□□□ -1.55
SMG6-219ENST00000575663 PYCARDQ9ULZ3 195 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 PDE10AQ9Y233 779 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 DYRK1BQ9Y463 629 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SPACA6W5XKT8 324 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 DNAJC13O75165 2243 aa5.36□□□□□ -1.55
SMG6-219ENST00000575663 SVEP1Q4LDE5 3571 aa5.35□□□□□ -1.55
SMG6-219ENST00000575663 SONP18583 2426 aaKnown RBP5.35□□□□□ -1.55
SMG6-219ENST00000575663 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.35□□□□□ -1.55
SMG6-219ENST00000575663 A0A0G2JN53 185 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms