RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 RPF2Q9H7B2 306 aaKnown RBP9.63□□□□□ -0.87
TVP23B-208ENST00000575261 SH2D2AQ9NP31 389 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 ZFP64Q9NPA5 681 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 QPCTLQ9NXS2 382 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 OPTCQ9UBM4 332 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 SNX24Q9Y343 169 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 SAR1BQ9Y6B6 198 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 ARHGAP21Q5T5U3 1957 aa9.63□□□□□ -0.87
TVP23B-208ENST00000575261 FLNAP21333 2647 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 LRRC3CA6NJW4 275 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SUPT3HB4E1H0 165 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SAP18O00422 153 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 EIF3HO15372 352 aaKnown RBP eCLIP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 KERAO60938 352 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SUPT3HO75486 399 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 NADKO95544 446 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 FBXO45P0C2W1 286 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 TLX1P31314 330 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 IST1P53990 364 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DLX5P56178 289 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 HERVK_113P63132 956 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ERVK-8P63133 956 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 CALCOCO2Q13137 446 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SLAMF1Q13291 335 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DDX39BQ13838 428 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SLMAPQ14BN4 828 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SPRED3Q2MJR0 410 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DEPDC1Q5TB30 811 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 OR4C11Q6IEV9 310 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 GRHL2Q6ISB3 625 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 RAPH1Q70E73 1250 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 TBC1D1Q86TI0 1168 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 LIX1LQ8IVB5 337 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 OR4N5Q8IXE1 308 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ZZZ3Q8IYH5 903 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 LRRC25Q8N386 305 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ZCCHC7Q8N3Z6 543 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 LIX1Q8N485 282 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 CHDHQ8NE62 594 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 OR10G3Q8NGC4 313 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 NEIL3Q8TAT5 605 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 STAG3L4Q8TBR4 150 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 UBTD2Q8WUN7 234 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 NRGNQ92686 78 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 TANKQ92844 425 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 RGMAQ96B86 450 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 PPWD1Q96BP3 646 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ZNF597Q96LX8 424 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 GAL3ST4Q96RP7 486 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 NAPGQ99747 312 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 FOXC2Q99958 501 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DOHHQ9BU89 302 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 CNPPD1Q9BV87 410 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SORBS1Q9BX66 1292 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ERVK-6Q9BXR3 956 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 OR51B5Q9H339 312 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SAYSD1Q9NPB0 183 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 SEMA4BQ9NPR2 832 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DMRT3Q9NQL9 472 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 DNAJB12Q9NXW2 375 aaKnown RBP9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ALKBH4Q9NXW9 302 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 CNIH4Q9P003 139 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ADGRE2Q9UHX3 823 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 ERVK-19Q9WJR5 959 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
TVP23B-208ENST00000575261 NCKAP5O14513 1909 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 IQANK1A0A1B0GTG1 560 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 FAM221AA4D161 298 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 FAM159BA6NKW6 160 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 OR6C76A6NM76 312 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 HSPB2A8KAH6 182 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 UBXN8O00124 270 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 HRKO00198 91 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 PLPP1O14494 284 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 DVL2O14641 736 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 OR10H2O60403 315 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 DIAPH2O60879 1101 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 PRKRAO75569 313 aaKnown RBP9.61□□□□□ -0.87
TVP23B-208ENST00000575261 CTAG2O75638 210 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 SLC35E2BP0CK96 405 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 EPB42P16452 691 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 SERPINB3P29508 390 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 SPRP35270 261 aaPredicted RBP9.61□□□□□ -0.87
TVP23B-208ENST00000575261 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 KIR2DL3P43628 341 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 ARFIP1P53367 373 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 HNRNPH2P55795 449 aaKnown RBP9.61□□□□□ -0.87
TVP23B-208ENST00000575261 GNG11P61952 73 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 PHEXP78562 749 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 PCDH1Q08174 1060 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 EBPQ15125 230 aaKnown RBP9.61□□□□□ -0.87
TVP23B-208ENST00000575261 HSPB2Q16082 182 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 NTRK2Q16620 822 aa9.61□□□□□ -0.87
TVP23B-208ENST00000575261 TBCELQ5QJ74 424 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms