RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DCDP81605 110 aaKnown RBP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 SLC13A2Q13183 592 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 C8orf82Q6P1X6 216 aaPredicted RBP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 ZC3H7AQ8IWR0 971 aaKnown RBP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 MSRB3Q8IXL7 192 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF595Q8IYB9 648 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 CCDC116Q8IYX3 515 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 PGAM4Q8N0Y7 254 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 WDR36Q8NI36 951 aaKnown RBP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 ANKRD9Q96BM1 317 aaPredicted RBP22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 GLIPR2Q9H4G4 154 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 LANCL2Q9NS86 450 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 NDE1Q9NXR1 346 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 SLC25A37Q9NYZ2 338 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 PCDHB14Q9Y5E9 798 aa22.6■■□□□ 1.21
ATPAF1-213ENST00000574428 MEN1O00255 615 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 ERN1O75460 977 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 ANP32DO95626 131 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 GPR75O95800 540 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 CSNK2A2P19784 350 aaPredicted RBP22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 TRPC1P48995 793 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 BTG2P78543 158 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 LRRC74AQ0VAA2 488 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 DNAL1Q4LDG9 190 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 VWA2Q5GFL6 755 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 LRIF1Q5T3J3 769 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 TMPRSS12Q86WS5 348 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 FAM13CQ8NE31 585 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 SUN3Q8TAQ9 357 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 OR5P2Q8WZ92 322 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 OR1F2PQ96R84 312 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 CGREF1Q99674 301 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 GPATCH1Q9BRR8 931 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 DDA1Q9BW61 102 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 PRTFDC1Q9NRG1 225 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 ACSS1Q9NUB1 689 aaPredicted RBP22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 PCDHGB4Q9UN71 923 aa22.59■■□□□ 1.21
ATPAF1-213ENST00000574428 TEX51A0A1B0GUA7 166 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 BMP10O95393 424 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 NPPAP01160 153 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 HOXB9P17482 250 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 MAOAP21397 527 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 GAB1Q13480 694 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 RSPO4Q2I0M5 234 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 MFSD4BQ5TF39 518 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 LCN10Q6JVE6 187 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 ZNF621Q6ZSS3 439 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 PRSS58Q8IYP2 241 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 AURKBQ96GD4 344 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 ASPSCR1Q9BZE9 553 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 AKIRIN1Q9H9L7 192 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 MKKSQ9NPJ1 570 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 TAS2R9Q9NYW1 312 aa22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 PTPRZ1P23471 2315 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-213ENST00000574428 TRBV5-3A0A0A0MS03 114 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 TGFBR3LH3BV60 316 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 CLDN4O14493 209 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 NVLO15381 856 aaKnown RBP22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 ATP6V1G2O95670 118 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 RIPK1Q13546 671 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 CEBPEQ15744 281 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 CLEC4FQ8N1N0 589 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 LRRC25Q8N386 305 aaPredicted RBP22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 DNAJB8Q8NHS0 232 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 MCUR1Q96AQ8 359 aa22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 ZNF282Q9UDV7 671 aaPredicted RBP22.58■■□□□ 1.2
ATPAF1-213ENST00000574428 BLACEA4D250 179 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 C9orf172C9J069 976 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 CTNSO60931 367 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 C1QCP02747 245 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 CPMP14384 443 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 SLC6A2P23975 617 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 CDK9P50750 372 aaKnown RBP22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 FOXL2P58012 376 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 MINDY4Q4G0A6 757 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 RABL3Q5HYI8 236 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 GALNT6Q8NCL4 622 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 GOT1L1Q8NHS2 421 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 ZFP28Q8NHY6 868 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 HOPXQ9BPY8 73 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 ZPBPQ9BS86 351 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 THTPAQ9BU02 230 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 TRIM4Q9C037 500 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 CXorf36Q9H7Y0 433 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 DLL3Q9NYJ7 618 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 IFT80Q9P2H3 777 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 PACSIN3Q9UKS6 424 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 VPS4AQ9UN37 437 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 SNX8Q9Y5X2 465 aa22.57■■□□□ 1.2
ATPAF1-213ENST00000574428 STK17BO94768 372 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 PORP16435 677 aaPredicted RBP22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 PPP2R1BP30154 601 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 MPIP34949 423 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 SOAT1P35610 550 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 SLC7A2P52569 658 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 HSD17B7P56937 341 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 MLC1Q15049 377 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 LTB4RQ15722 352 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 NANOGP8Q6NSW7 305 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms