RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF366Q8N895 744 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 OR8J1Q8NGP2 316 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 DHRS1Q96LJ7 313 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 IL17FQ96PD4 163 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 PHOX2BQ99453 314 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MMP28Q9H239 520 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 ABT1Q9ULW3 272 aaKnown RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 SSR3Q9UNL2 185 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MEIOCA2RUB1 952 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 FAAHO00519 579 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TFECO14948 347 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 LILRB5O75023 590 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 CHRM5P08912 532 aaPredicted RBP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 CLEC2LP0C7M8 214 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TNNI3P19429 210 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MMP12P39900 470 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TARDBPQ13148 414 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCARF1-206ENST00000573852 ZFP69Q49AA0 526 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TMIGD1Q6UXZ0 262 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 SLC9B2Q86UD5 537 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 VN1R2Q8NFZ6 395 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 LILRB4Q8NHJ6 448 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 SLC7A13Q8TCU3 470 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MIXL1Q9H2W2 232 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 MVB12BQ9H7P6 319 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 ABCB9Q9NP78 766 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 TVP23BQ9NYZ1 205 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 C5AR2Q9P296 337 aa18.1■□□□□ 0.49
SCARF1-206ENST00000573852 IQCMA0A1B0GVH7 501 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 TBX6O95947 436 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 DDOSTP39656 456 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 MANFP55145 182 aaKnown RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 WDR5P61964 334 aaKnown RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 RACK1P63244 317 aaKnown RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 HYAL2Q12891 473 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 MLLT11Q13015 90 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 SLAMF1Q13291 335 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 HEPACAMQ14CZ8 416 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 FLYWCH1Q4VC44 716 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF805Q5CZA5 627 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 FAM92BQ6ZTR7 304 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 TRAPPC5Q8IUR0 188 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 RACGAP1Q9H0H5 632 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 OR2AG1Q9H205 316 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 BOLA1Q9Y3E2 137 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 K7ESM1 405 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 PRKYO43930 277 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 TBRG1Q3YBR2 411 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 GLYR1Q49A26 553 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 IRF7Q92985 503 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 TMEM203Q969S6 136 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 SLC25A46Q96AG3 418 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF689Q96CS4 500 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 FUZQ9BT04 418 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 SEMA3GQ9NS98 782 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 TXNL4BQ9NX01 149 aaKnown RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 IL36AQ9UHA7 158 aa18.09■□□□□ 0.49
SCARF1-206ENST00000573852 KIF26AQ9ULI4 1882 aaPredicted RBP18.09■□□□□ 0.49
SCARF1-206ENST00000573852 PLPP1O14494 284 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 TLX2O43763 284 aaPredicted RBP18.08■□□□□ 0.49
SCARF1-206ENST00000573852 SOD1P00441 154 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 MSL3P1P0C860 447 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 DDCP20711 480 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 GSTM5P46439 218 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 OCLNQ16625 522 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 TRIM60Q495X7 471 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 RNLSQ5VYX0 342 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 THOC7Q6I9Y2 204 aaKnown RBP18.08■□□□□ 0.49
SCARF1-206ENST00000573852 FAM131AQ6UXB0 335 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 TRMT11Q7Z4G4 463 aaKnown RBP18.08■□□□□ 0.49
SCARF1-206ENST00000573852 C6orf120Q7Z4R8 191 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 COMTD1Q86VU5 262 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 GALNT6Q8NCL4 622 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 NRTNQ99748 197 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 ACAT2Q9BWD1 397 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 RERGLQ9H628 205 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 WDR70Q9NW82 654 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 HCFC1R1Q9NWW0 138 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 PLAGL1Q9UM63 463 aa18.08■□□□□ 0.49
SCARF1-206ENST00000573852 ANHXE9PGG2 379 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 HMGN4O00479 90 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 MYL12BO14950 172 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 SYN1P17600 705 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 ETV5P41161 510 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 KCNJ5P48544 419 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 ETV1P50549 477 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 MRPS15P82914 257 aaKnown RBP18.08■□□□□ 0.48
SCARF1-206ENST00000573852 DAB2P98082 770 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 HSPB3Q12988 150 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 PIN1Q13526 163 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-206ENST00000573852 OR52I1Q8NGK6 324 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 OR5P2Q8WZ92 322 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 ZNF354BQ96LW1 612 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 ZNF717Q9BY31 904 aaPredicted RBP18.08■□□□□ 0.48
SCARF1-206ENST00000573852 HCN2Q9UL51 889 aa18.08■□□□□ 0.48
SCARF1-206ENST00000573852 ANKRD34BA5PLL1 514 aa18.07■□□□□ 0.48
SCARF1-206ENST00000573852 CENPXA8MT69 81 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms