RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 NPEPPSL1A6NEC2 478 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 HRKO00198 91 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 CLGNO14967 610 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SH3BGRLO75368 114 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 CRLF1O75462 422 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 CNOT4O95628 575 aaKnown RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 IL18BPO95998 194 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 KRT14P02533 472 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 FGGP02679 453 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MLNP12872 115 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 CYP4B1P13584 511 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 NID1P14543 1247 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 GNAZP19086 355 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 FPR1P21462 350 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 GDF5P43026 501 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 TGM3Q08188 693 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 ACKR1Q16570 336 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 C18orf21Q32NC0 220 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 EIPR1Q53HC9 387 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 BICRALQ6AI39 1079 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 VASNQ6EMK4 673 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 ADNP2Q6IQ32 1131 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 ABHD17CQ6PCB6 329 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SBSNQ6UWP8 590 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 TMEM64Q6YI46 380 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SLCO4C1Q6ZQN7 724 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 PHC2Q8IXK0 858 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 GCNT2Q8N0V5 402 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 KRT78Q8N1N4 520 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SLC15A4Q8N697 577 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 INTS12Q96CB8 462 aaKnown RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SERPINB12Q96P63 405 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MAPKAP1Q9BPZ7 522 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 UGT2B28Q9BY64 529 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SLC17A6Q9P2U8 582 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 CNOT11Q9UKZ1 510 aaKnown RBP11.15□□□□□ -0.62
PRPF8-208ENST00000573716 GUCA1BQ9UMX6 200 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 SPACA6W5XKT8 324 aa11.15□□□□□ -0.62
PRPF8-208ENST00000573716 MED12Q93074 2177 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 CDC7O00311 574 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 FGF17O60258 216 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 TRIM3O75382 744 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 CLEC3AO75596 197 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 FBXO45P0C2W1 286 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 CPN2P22792 545 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 GABRB3P28472 473 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 MAGEA6P43360 314 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 CDK9P50750 372 aaKnown RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 SRYQ05066 204 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 WIPI1Q5MNZ9 446 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 PLXDC2Q6UX71 529 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 FRA10AC1Q70Z53 315 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 DND1Q8IYX4 353 aaKnown RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 AGGF1Q8N302 714 aaeCLIP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 MAIP1Q8WWC4 291 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 SLC44A1Q8WWI5 657 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 ABTB1Q969K4 478 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 RBM18Q96H35 190 aaKnown RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 WDYHV1Q96HA8 205 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 ART5Q96L15 291 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 RILPQ96NA2 401 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 GNRHR2Q96P88 292 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 SFXN3Q9BWM7 321 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 CALHM2Q9HA72 323 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 LYRM4Q9HD34 91 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 PPANQ9NQ55 473 aaKnown RBP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF8-208ENST00000573716 KLHL28Q9NXS3 571 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 ZKSCAN5Q9Y2L8 839 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 TESMINQ9Y4I5 508 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
PRPF8-208ENST00000573716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 NCF1BA6NI72 391 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 NCF1CA8MVU1 366 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 H0Y3Z8 333 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 TP53I11O14683 189 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 AHSGP02765 367 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 CCDC175P0C221 793 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 NCF1P14598 390 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-208ENST00000573716 SLCO1A2P46721 670 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 STT3AP46977 705 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 KCNC1P48547 511 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 PTH2RP49190 550 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 DIO3P55073 304 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 FBXW4P57775 412 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 HERVK_113P63132 956 aa11.13□□□□□ -0.63
PRPF8-208ENST00000573716 ERVK-8P63133 956 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms