RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TRAPPC6AO75865 159 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 FBXO45P0C2W1 286 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 MSH2P43246 934 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 STT3AP46977 705 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 HP1BP3Q5SSJ5 553 aaPredicted RBP18.2■□□□□ 0.5
CCDC40-206ENST00000572083 NSUN5P2Q63ZY6 315 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 TRMT10BQ6PF06 316 aaKnown RBP18.2■□□□□ 0.5
CCDC40-206ENST00000572083 ADAMTSL2Q86TH1 951 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 PM20D2Q8IYS1 436 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 NKAPQ8N5F7 415 aaKnown RBP18.2■□□□□ 0.5
CCDC40-206ENST00000572083 ACOT4Q8N9L9 421 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 LRRN4CLQ8ND94 238 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 CFAP36Q96G28 342 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 COX4I2Q96KJ9 171 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 TMEM79Q9BSE2 394 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 PITHD1Q9GZP4 211 aaPredicted RBP18.2■□□□□ 0.5
CCDC40-206ENST00000572083 PRDM14Q9GZV8 571 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 SLC6A5Q9Y345 797 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 ZANQ9Y493 2812 aa18.2■□□□□ 0.5
CCDC40-206ENST00000572083 CLGNO14967 610 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 GOSR1O95249 250 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 C1QAP02745 245 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 CD22P20273 847 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 CPN2P22792 545 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 ATP5A1P25705 553 aaKnown RBP18.19■□□□□ 0.5
CCDC40-206ENST00000572083 DCST1Q5T197 706 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 BICRALQ6AI39 1079 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 SLC15A4Q8N697 577 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 TRIM58Q8NG06 486 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 ANKRD49Q8WVL7 239 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 FBXL20Q96IG2 436 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 PRM3Q9NNZ6 103 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 DNAJC11Q9NVH1 559 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 GPRC5BQ9NZH0 403 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 CTNNAL1Q9UBT7 734 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 SPACA6W5XKT8 324 aa18.19■□□□□ 0.5
CCDC40-206ENST00000572083 FBN1P35555 2871 aaKnown RBP18.19■□□□□ 0.5
CCDC40-206ENST00000572083 CSPG4Q6UVK1 2322 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 H7C1Q1 480 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 DYRK3O43781 588 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 TRIM3O75382 744 aaPredicted RBP18.18■□□□□ 0.5
CCDC40-206ENST00000572083 CTSSP25774 331 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 SERPINB3P29508 390 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 IGLV3-21P80748 117 aaPredicted RBP18.18■□□□□ 0.5
CCDC40-206ENST00000572083 PLIN5Q00G26 463 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 DOC2AQ14183 400 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 CYP1B1Q16678 543 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 SLC29A4Q7RTT9 530 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 P3H2Q8IVL5 708 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 DND1Q8IYX4 353 aaKnown RBP18.18■□□□□ 0.5
CCDC40-206ENST00000572083 SNX31Q8N9S9 440 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 ANKRD7Q92527 254 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 DIO2Q92813 273 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 ESAMQ96AP7 390 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 ART5Q96L15 291 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 NAT9Q9BTE0 207 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 CAPS2Q9BXY5 557 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 ROGDIQ9GZN7 287 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 WWTR1Q9GZV5 400 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 EHD1Q9H4M9 534 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 WWOXQ9NZC7 414 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 JKAMPQ9P055 326 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 PSAT1Q9Y617 370 aa18.18■□□□□ 0.5
CCDC40-206ENST00000572083 TLN2Q9Y4G6 2542 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 FAM95CA0A1B0GW59 222 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 MBD3L4A6NDZ8 208 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 MBD3L3A6NE82 208 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 MBD3L5A6NJ08 208 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 CD8B2A6NJW9 211 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 SMAD7O15105 426 aaKnown RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 TAPBPO15533 448 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 ARHGEF9O43307 516 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 ACSL3O95573 720 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 HIST1H1TP22492 207 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 OPRM1P35372 400 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 SSR2P43308 183 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 HERVK_113P63132 956 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 ERVK-8P63133 956 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 TGFBIQ15582 683 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 NTRK2Q16620 822 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 TMEM64Q6YI46 380 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 MBD3L2Q8NHZ7 208 aaPredicted RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 PTCD3Q96EY7 689 aaKnown RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 RBM18Q96H35 190 aaKnown RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 TBCDQ9BTW9 1192 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 RBM24Q9BX46 236 aaKnown RBP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 ERVK-6Q9BXR3 956 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 MS4A8Q9BY19 250 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC40-206ENST00000572083 CHMP2BQ9UQN3 213 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 ERVK-19Q9WJR5 959 aa18.17■□□□□ 0.5
CCDC40-206ENST00000572083 DOCK7Q96N67 2140 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 SH3D21A4FU49 640 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 SAP18O00422 153 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 PRKRAO75569 313 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 HSPA7P48741 367 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 CDK9P50750 372 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 TAS2R39P59534 338 aa18.16■□□□□ 0.5
CCDC40-206ENST00000572083 EBPQ15125 230 aaKnown RBP18.16■□□□□ 0.5
CCDC40-206ENST00000572083 PPP1R7Q15435 360 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms