RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SEC22BO75396 215 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
CCDC40-205ENST00000571028 FHP07954 510 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 FGF4P08620 206 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 FAM58BPP0C7Q3 252 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 HSD3B1P14060 373 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 HSD3B2P26439 372 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 CASP6P55212 293 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 ACSM2AQ08AH3 577 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
CCDC40-205ENST00000571028 TESK1Q15569 626 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 GALNTL6Q49A17 601 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 ACSM2BQ68CK6 577 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 CLNKQ7Z7G1 428 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 METTL4Q8N3J2 472 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 CDC26Q8NHZ8 85 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 LRRC8CQ8TDW0 803 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 C8orf44Q96CB5 159 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 VPS50Q96JG6 964 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 SORT1Q99523 831 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 NPLQ9BXD5 320 aaPredicted RBP12.47□□□□□ -0.41
CCDC40-205ENST00000571028 VN1R1Q9GZP7 353 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 PSD3Q9NYI0 1048 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 GIMAP2Q9UG22 337 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 SH3BGRL2Q9UJC5 107 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 DAPP1Q9UN19 280 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 SPACA6W5XKT8 324 aa12.47□□□□□ -0.41
CCDC40-205ENST00000571028 MTORP42345 2549 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 IGLV3-12A0A075B6K2 115 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 A0A0A6YYD5 115 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ATP6AP2A0A1C7CYW4 349 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 GLOD5A6NK44 160 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 RGS14O43566 566 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ALOX12BO75342 701 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ATP6AP2O75787 350 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 SEMA3DO95025 777 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 NADKO95544 446 aaPredicted RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 MAOAP21397 527 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 JAK1P23458 1154 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TPP2P29144 1249 aaPredicted RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 RPL14P50914 215 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 MAPK12P53778 367 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 HNRNPH2P55795 449 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ARG2P78540 354 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ID2Q02363 134 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 EEF1A2Q05639 463 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 RBPJQ06330 500 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TBL3Q12788 808 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 UGT3A2Q3SY77 523 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TUBB8Q3ZCM7 444 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 C18orf63Q68DL7 685 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LANCL3Q6ZV70 420 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 GPR180Q86V85 440 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TMEM52Q8NDY8 209 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 OR1N1Q8NGS0 311 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 OR2T11Q8NH01 316 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 METTL21AQ8WXB1 218 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TSLPQ969D9 159 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 UCN3Q969E3 161 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 NACC2Q96BF6 587 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 PTCHD1Q96NR3 888 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 OR1F2PQ96R84 312 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ZNF717Q9BY31 904 aaPredicted RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LHPPQ9H008 270 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 DDX31Q9H8H2 851 aaKnown RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LRTM1Q9HBL6 345 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LYRM4Q9HD34 91 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 PRTFDC1Q9NRG1 225 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 LANCL2Q9NS86 450 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 SEMA3GQ9NS98 782 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 THAP1Q9NVV9 213 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 PPT2Q9UMR5 302 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 ATG4BQ9Y4P1 393 aa12.46□□□□□ -0.41
CCDC40-205ENST00000571028 POLR3HQ9Y535 204 aaPredicted RBP12.46□□□□□ -0.41
CCDC40-205ENST00000571028 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.42
CCDC40-205ENST00000571028 IGHV3-20A0A0C4DH32 117 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 GNG14A0A1W2PPG7 69 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 WASHC1A8K0Z3 465 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 A8MUA0 341 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 CLDN4O14493 209 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 PCDH17O14917 1159 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 PCDH7O60245 1069 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 PRMT3O60678 531 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 PEX11AO75192 247 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 MYO1DO94832 1006 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 CD1EP15812 388 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 MMP11P24347 488 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 EFNA3P52797 238 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF33BQ06732 778 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 NSDHLQ15738 373 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.45□□□□□ -0.42
CCDC40-205ENST00000571028 XKRXQ6PP77 449 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 ISLR2Q6UXK2 745 aa12.45□□□□□ -0.42
CCDC40-205ENST00000571028 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms