RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ATG10Q9H0Y0 220 aa14.68□□□□□ -0.06
SMG6-207ENST00000570756 POLR2J3Q9H1A7 115 aaKnown RBP14.68□□□□□ -0.06
SMG6-207ENST00000570756 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
SMG6-207ENST00000570756 ZDHHC3Q9NYG2 299 aa14.68□□□□□ -0.06
SMG6-207ENST00000570756 POLHQ9Y253 713 aa14.68□□□□□ -0.06
SMG6-207ENST00000570756 SLC45A1Q9Y2W3 748 aa14.68□□□□□ -0.06
SMG6-207ENST00000570756 FAM227AF5H4B4 570 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 QSOX1O00391 747 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 FAAHO00519 579 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 OR10H3O60404 316 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 SCO1O75880 301 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CLDN7O95471 211 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TPOP07202 933 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 OR56A5P0C7T3 313 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 MPC1LP0DKB6 136 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 HK1P19367 917 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CFL1P23528 166 aaKnown RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 CTGFP29279 349 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CD52P31358 61 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ETV5P41161 510 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ETV1P50549 477 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ATP12AP54707 1039 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ADAM15Q13444 863 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 COL28A1Q2UY09 1125 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 DCST1Q5T197 706 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CBARPQ8N350 705 aaPredicted RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 HUS1BQ8NHY5 278 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TEFMQ96QE5 360 aaKnown RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 PKP4Q99569 1192 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 SEPT5Q99719 369 aaPredicted RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 ZSCAN5AQ9BUG6 496 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 RC3H2Q9HBD1 1191 aaKnown RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 HEPACAM2A8MVW5 462 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 H0YIV9 168 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 PLOD3O60568 738 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 RAF1P04049 648 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CHRM5P08912 532 aaPredicted RBP14.67□□□□□ -0.06
SMG6-207ENST00000570756 ARAFP10398 606 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CD22P20273 847 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TALDO1P37837 337 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 PFN3P60673 137 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ZNF284Q2VY69 593 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CTXN3Q4LDR2 81 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 KCTD20Q7Z5Y7 419 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 CDH24Q86UP0 819 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 FAM26EQ8N5C1 309 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 SYT14Q8NB59 555 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 OR4K1Q8NGD4 311 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TM9SF4Q92544 642 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 P2RY13Q9BPV8 354 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMG6-207ENST00000570756 EMC7Q9NPA0 242 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TAS2R7Q9NYW3 318 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 ATP6V1HQ9UI12 483 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 MGAT4AQ9UM21 535 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 MAP4K5Q9Y4K4 846 aa14.67□□□□□ -0.06
SMG6-207ENST00000570756 TMEM129A0AVI4 362 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 PIPSLA2A3N6 862 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 SMAD6O43541 496 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 CHP2O43745 196 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 LZTS3O60299 673 aaPredicted RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 C6orf47O95873 294 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 ZNF865P0CJ78 1059 aaPredicted RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 TIA1P31483 386 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMG6-207ENST00000570756 SGSHP51688 502 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 KCNC3Q14003 757 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 SLC25A30Q5SVS4 291 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 CXorf57Q6NSI4 855 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 CEACAM20Q6UY09 585 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 C16orf59Q7L2K0 433 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 FBXO22Q8NEZ5 403 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 ADAM2Q99965 735 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 POLDIP3Q9BY77 421 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 REEP4Q9H6H4 257 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 CWH43Q9H720 699 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 SGK2Q9HBY8 427 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 TESQ9UGI8 421 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 YARS2Q9Y2Z4 477 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 FCF1Q9Y324 198 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 TLX2O43763 284 aaPredicted RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 SLC19A2O60779 497 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 PSIP1O75475 530 aaKnown RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 DHFRP00374 187 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 IFNA7P01567 189 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 PTPN5P54829 565 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 CYP4F8P98187 520 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 MGAT3Q09327 533 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 DOC2AQ14183 400 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 MFSD13AQ14CX5 517 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 CCDC85BQ15834 202 aaPredicted RBP14.66□□□□□ -0.06
SMG6-207ENST00000570756 DUSP6Q16828 381 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 GRHL2Q6ISB3 625 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 FAM122CQ6P4D5 195 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 TMEM107Q6UX40 140 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 TPGS1Q6ZTW0 290 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 ABI3BPQ7Z7G0 1075 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 LUZP2Q86TE4 346 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 UCN3Q969E3 161 aa14.66□□□□□ -0.06
SMG6-207ENST00000570756 MSANTD3Q96H12 275 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms