RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 OSGIN2Q9Y236 505 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 CLDN16Q9Y5I7 305 aa14.13□□□□□ -0.15
RAB40B-203ENST00000570676 PRRC2CQ9Y520 2896 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 A0A0G2JN53 185 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 FAM227AF5H4B4 570 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 ERI3O43414 337 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PRMT3O60678 531 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 CLEC3AO75596 197 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 JUNP05412 331 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 STSP08842 583 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 LINC00032P0C843 101 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 MST1P26927 711 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 SERPINB1P30740 379 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PIK3CBP42338 1070 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 ST13P50502 369 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 KCNK10P57789 538 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PHEXP78562 749 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 SRSF11Q05519 484 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 ACTN3Q08043 901 aaPredicted RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF766Q5HY98 468 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 MAMDC2Q7Z304 686 aaPredicted RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 SCUBE1Q8IWY4 988 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 LGI4Q8N135 537 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 RNF175Q8N4F7 328 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 NFAM1Q8NET5 270 aaPredicted RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 RFWD2Q8NHY2 731 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 SEC16BQ96JE7 1060 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 SIGLEC12Q96PQ1 595 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 MTERF1Q99551 399 aaKnown RBP14.12□□□□□ -0.15
RAB40B-203ENST00000570676 HES7Q9BYE0 225 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 RHBGQ9H310 441 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PFDN4Q9NQP4 134 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PRDM9Q9NQV7 894 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 ADGRE2Q9UHX3 823 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 DCTN4Q9UJW0 460 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 TSC22D4Q9Y3Q8 395 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PCDHGB6Q9Y5F9 930 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 PTGDR2Q9Y5Y4 395 aa14.12□□□□□ -0.15
RAB40B-203ENST00000570676 DIDO1Q9BTC0 2240 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 LRIT2A6NDA9 550 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 TRPC5OSA6NMA1 111 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 GABRR3A8MPY1 467 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 TGFBR3LH3BV60 316 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 PSMD12O00232 456 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 FOXE1O00358 373 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF195O14628 629 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 LRRTM2O43300 516 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 RASAL1O95294 804 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 ALOX15P16050 662 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 HNRNPFP52597 415 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 AQP5P55064 265 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 RAB38P57729 211 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 RPS13P62277 151 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 BTN3A2P78410 334 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 CBX1P83916 185 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 SF3A3Q12874 501 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 RUNX2Q13950 521 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 OR1C1Q15619 314 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 RNF165Q6ZSG1 346 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 SLC5A8Q8N695 610 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 TMEM52Q8NDY8 209 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 SUN3Q8TAQ9 357 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 ZNF473Q8WTR7 871 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 SCMH1Q96GD3 660 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 CCT7Q99832 543 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 ELAC2Q9BQ52 826 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 NPLQ9BXD5 320 aaPredicted RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 DMRT3Q9NQL9 472 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 ANKRD10Q9NXR5 420 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 MMACHCQ9Y4U1 282 aa14.11□□□□□ -0.15
RAB40B-203ENST00000570676 UTP20O75691 2785 aaKnown RBP14.11□□□□□ -0.15
RAB40B-203ENST00000570676 A0A0G2JND7 137 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 SLC28A1O00337 649 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 RGS14O43566 566 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 DIAPH2O60879 1101 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 NEURL1O76050 574 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CRYABP02511 175 aaKnown RBP14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CERS1P27544 350 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CD96P40200 585 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 TAS2R50P59544 299 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CSTF3Q12996 717 aaKnown RBP14.1□□□□□ -0.15
RAB40B-203ENST00000570676 IMPG1Q17R60 797 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 EPGNQ6UW88 154 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 TRIM46Q7Z4K8 759 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 GBP7Q8N8V2 638 aaPredicted RBP14.1□□□□□ -0.15
RAB40B-203ENST00000570676 APCDD1LQ8NCL9 501 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 OR2L5Q8NG80 312 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 DNAJB8Q8NHS0 232 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 C3orf30Q96M34 536 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CCT8L2Q96SF2 557 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 CSF3RQ99062 836 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 UTP23Q9BRU9 249 aaKnown RBP14.1□□□□□ -0.15
RAB40B-203ENST00000570676 SIKE1Q9BRV8 207 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 ACPTQ9BZG2 426 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 MEAF6Q9HAF1 191 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 BRF2Q9HAW0 419 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 KLHL14Q9P2G3 628 aa14.1□□□□□ -0.15
RAB40B-203ENST00000570676 SLC12A4Q9UP95 1085 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms