RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 THAP3Q8WTV1 239 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 FAR1Q8WVX9 515 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 UCN3Q969E3 161 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 PPWD1Q96BP3 646 aaKnown RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 TM4SF18Q96CE8 201 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 SIGLEC12Q96PQ1 595 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 ACPTQ9BZG2 426 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 LRFN1Q9P244 771 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 SLC17A7Q9P2U7 560 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 COPS7AQ9UBW8 275 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 C1orf226A1L170 272 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 PRKNO60260 465 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 OR10H2O60403 315 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 CRCPO75575 148 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ITGA10O75578 1167 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 RASAL1O95294 804 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 SLC35E2P0CK97 266 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 UROSP10746 265 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 CD46P15529 392 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 CHN1P15882 459 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 CREB1P16220 341 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 GNLYP22749 145 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ALDH3A1P30838 453 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 GALNSP34059 522 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 TRHRP34981 398 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 HLCSP50747 726 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 HMGCS1Q01581 520 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF468Q5VIY5 522 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 SCIMPQ6UWF3 145 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF321PQ8N8H1 164 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 OR4K14Q8NGD5 310 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 OR5L2Q8NGL0 311 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF721Q8TF20 911 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ART5Q96L15 291 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 ZIM3Q96PE6 472 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 TRIM45Q9H8W5 580 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 MCM8Q9UJA3 840 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 YARS2Q9Y2Z4 477 aaKnown RBP12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 PCDHA9Q9Y5H5 950 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 NINQ8N4C6 2090 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 FLNCQ14315 2725 aa12.85□□□□□ -0.35
HERPUD1-218ENST00000569569 TMEM200CA6NKL6 621 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 CTIFO43310 598 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 TYROBPO43914 113 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 ERLIN1O75477 346 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 NEURL1O76050 574 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 CBX6O95503 412 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SERPINB3P29508 390 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 DEKP35659 375 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 XKP51811 444 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 RNF4P78317 190 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 BTKQ06187 659 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 ACSM2AQ08AH3 577 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 NR6A1Q15406 480 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SPRED3Q2MJR0 410 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 ACSM2BQ68CK6 577 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SLC25A25Q6KCM7 469 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 DGAT2L6Q6ZPD8 337 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 TRIM46Q7Z4K8 759 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 TMEM178AQ8NBL3 297 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 DNAJB8Q8NHS0 232 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SREK1Q8WXA9 508 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 RIT1Q92963 219 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SCMH1Q96GD3 660 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 APIPQ96GX9 242 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 C5orf34Q96MH7 638 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 TAAR6Q96RI8 345 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 MECRQ9BV79 373 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 FAIM2Q9BWQ8 316 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 SIRT5Q9NXA8 310 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 CES1P1Q9UKY3 287 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 PSME2Q9UL46 239 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
HERPUD1-218ENST00000569569 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 PCDH7O60245 1069 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 NPHS1O60500 1241 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 IGKV3-11P04433 115 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 SP1P08047 785 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 EDN3P14138 238 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 PORP16435 677 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 SSR4P51571 173 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 HK2P52789 917 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 ERVK-8P63133 956 aa12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 RAE1P78406 368 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF267Q14586 743 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms