RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 TRBV11-1A0A0K0K1C0 115 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 GNG14A0A1W2PPG7 69 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 TMEM120BA0PK00 339 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 HRKO00198 91 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SLC28A1O00337 649 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 GUCY1B2O75343 617 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SEC22BO75396 215 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 DDAH2O95865 285 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 ANXA4P09525 319 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 NEFHP12036 1026 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 ALOX15P16050 662 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 BGNP21810 368 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 PIK3R1P27986 724 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 ALDH9A1P49189 494 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 CLCN2P51788 898 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 XKP51811 444 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 ARG2P78540 354 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 BIKQ13323 160 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 KIAA0040Q15053 153 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 MEP1AQ16819 746 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SPIN4Q56A73 249 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 AGBL2Q5U5Z8 902 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 HHATQ5VTY9 493 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 C16orf47Q6ZP98 133 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 HDXQ7Z353 690 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 BEST3Q8N1M1 668 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 MORN4Q8NDC4 146 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 DAZLQ92904 295 aaKnown RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 PNPLA2Q96AD5 504 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SENP5Q96HI0 755 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 OR8D2Q9GZM6 311 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 EPN3Q9H201 632 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SLAMF7Q9NQ25 335 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 SIRT5Q9NXA8 310 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 PPIEQ9UNP9 301 aaKnown RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
CNOT1-213ENST00000568158 POLR3HQ9Y535 204 aaPredicted RBP12.12□□□□□ -0.47
CNOT1-213ENST00000568158 CPAMD8Q8IZJ3 1885 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 C1orf226A1L170 272 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 RGS14O43566 566 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ERAL1O75616 437 aaKnown RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 HSPA4LO95757 839 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SERPINE1P05121 402 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 IL3P08700 152 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TIA1P31483 386 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SERPINB5P36952 375 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 FEN1P39748 380 aaKnown RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 CD96P40200 585 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SLC1A6P48664 564 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ABCE1P61221 599 aaKnown RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TLE1Q04724 770 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 C2orf80Q0P641 193 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 STX3Q13277 289 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TERF2Q15554 542 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 IGFBP7Q16270 282 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 OR52E8Q6IFG1 317 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SLC48A1Q6P1K1 146 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 GALNT18Q6P9A2 607 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 DDIASQ8IXT1 998 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ST13P4Q8IZP2 240 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SLC5A8Q8N695 610 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 SLC2A12Q8TD20 617 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ZNF721Q8TF20 911 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TWIST2Q8WVJ9 160 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.11□□□□□ -0.471e-7■□□□□ 8.6
CNOT1-213ENST00000568158 LRTM1Q9HBL6 345 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 ANKRD10Q9NXR5 420 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TEKT2Q9UIF3 430 aa12.11□□□□□ -0.47
CNOT1-213ENST00000568158 TMEM200CA6NKL6 621 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 OR10H2O60403 315 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 RSL1D1O76021 490 aaKnown RBP12.1□□□□□ -0.47
CNOT1-213ENST00000568158 ZFAND5O76080 213 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 SORBS2O94875 1100 aaKnown RBP12.1□□□□□ -0.47
CNOT1-213ENST00000568158 CHEK2O96017 543 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 CT62P0C5K7 136 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 SLC35E2P0CK97 266 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 COX7A2P14406 83 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 PORP16435 677 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-213ENST00000568158 PTGER1P34995 402 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 MLF1P58340 268 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 DUSP2Q05923 314 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 TUBA3CQ13748 450 aa12.1□□□□□ -0.47
CNOT1-213ENST00000568158 INPP5JQ15735 1006 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms