RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 FOLH1Q04609 750 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 IFT88Q13099 833 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ART3Q13508 389 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 MPEG1Q2M385 716 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SPRED3Q2MJR0 410 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 GGTA1PQ4G0N0 100 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 RNFT1Q5M7Z0 435 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 FRG2Q64ET8 278 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 C18orf63Q68DL7 685 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 DESI1Q6ICB0 168 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 MRM1Q6IN84 353 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 BRICD5Q6PL45 260 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 OPN5Q6U736 354 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 IL20RBQ6UXL0 311 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TIFABQ6ZNK6 161 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TRMT10CQ7L0Y3 403 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 MDGA2Q7Z553 956 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 LCA5Q86VQ0 697 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NUDT13Q86X67 352 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SPPL2CQ8IUH8 684 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SULF2Q8IWU5 870 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ST13P4Q8IZP2 240 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 EID3Q8N140 333 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZNF808Q8N4W9 903 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZNF321PQ8N8H1 164 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PTGR2Q8N8N7 351 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZFP62Q8NB50 900 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 GOLM1Q8NBJ4 401 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PSD4Q8NDX1 1056 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 MYRIPQ8NFW9 859 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 OR52B6Q8NGF0 335 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 OR5L2Q8NGL0 311 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 C16orf52Q8NHV5 167 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NUBPLQ8TB37 319 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZNF721Q8TF20 911 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ITLN2Q8WWU7 325 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 RBM18Q96H35 190 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 FBXL20Q96IG2 436 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SGCZQ96LD1 299 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 CDK15Q96Q40 435 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 FRG2BQ96QU4 278 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 RASL10BQ96S79 203 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SERPINI1Q99574 410 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 USB1Q9BQ65 265 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 MRPL57Q9BQC6 102 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 PELOQ9BRX2 385 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 SORBS1Q9BX66 1292 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 C1QTNF3Q9BXJ4 246 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZNF717Q9BY31 904 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 TSPAN10Q9H1Z9 355 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 MRPL46Q9H2W6 279 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 NOL11Q9H8H0 719 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 DDX31Q9H8H2 851 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 LIN28AQ9H9Z2 209 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 WDR41Q9HAD4 459 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ZBTB26Q9HCK0 441 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.44□□□□□ -1.7
CLK3-219ENST00000567805 LYARQ9NX58 379 aaKnown RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 AHSPQ9NZD4 102 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 FETUBQ9UGM5 382 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 SH3BGRL2Q9UJC5 107 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TINAGQ9UJW2 476 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 PCTPQ9UKL6 214 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NFU1Q9UMS0 254 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 NPIPA1Q9UND3 350 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ERVK-11Q9UQG0 969 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 RNF11Q9Y3C5 154 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ATG4BQ9Y4P1 393 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 ASB4Q9Y574 426 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 KLF2Q9Y5W3 355 aaPredicted RBP4.44□□□□□ -1.7
CLK3-219ENST00000567805 CACNA1DQ01668 2161 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 TACC2O95359 2948 aa4.44□□□□□ -1.7
CLK3-219ENST00000567805 HCFC1P51610 2035 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 APCP25054 2843 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 IQANK1A0A1B0GTG1 560 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 MYOCOSA0A1B0GUC4 107 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 A0A1W2PR48 441 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ARHGAP10A1A4S6 786 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR6C76A6NM76 312 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 A8MT66 165 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PRSS44E7EML9 344 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 E9PLN8 166 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 ACOT7O00154 380 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PRRG2O14669 202 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 HNRNPRO43390 633 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 HS6ST1O60243 411 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR10H2O60403 315 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 CDC40O60508 579 aaKnown RBP eCLIP4.43□□□□□ -1.7
CLK3-219ENST00000567805 PRKRAO75569 313 aaKnown RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 OR6B1O95007 311 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 AIFM1O95831 613 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 OTCP00480 354 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 F12P00748 615 aaPredicted RBP4.43□□□□□ -1.7
CLK3-219ENST00000567805 GSTA1P08263 222 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SBK3P0C264 359 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 SLC35E2P0CK97 266 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 TAC1P20366 129 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 PIK3R1P27986 724 aa4.43□□□□□ -1.7
CLK3-219ENST00000567805 GCAP28676 217 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms