RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 BCDIN3DQ7Z5W3 292 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 LAPTM4BQ86VI4 370 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 GLCCI1Q86VQ1 547 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SLAIN1Q8ND83 568 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 GPR156Q8NFN8 814 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 VOPP1Q96AW1 172 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 UPRTQ96BW1 309 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 MAP6Q96JE9 813 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 PKP4Q99569 1192 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 KCNJ15Q99712 375 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 POLDIP3Q9BY77 421 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 TRIM45Q9H8W5 580 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 MARCH5Q9NX47 278 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 PPIL1Q9Y3C6 166 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 LYRM1O43325 122 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SH3BGRLO75368 114 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 DDX5P17844 614 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 CHI3L1P36222 383 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 GAS1P54826 345 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 RPS13P62277 151 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SNRPD2P62316 118 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 RPS25P62851 125 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 PTSQ03393 145 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 RTP2Q5QGT7 225 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 ATAT1Q5SQI0 421 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 CCSAPQ6IQ19 270 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 RETSATQ6NUM9 610 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 CNIH2Q6PI25 160 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SERPINA13PQ6UXR4 307 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 RFLNAQ6ZTI6 216 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 PDZD3Q86UT5 571 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 APCDD1Q8J025 514 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SIX5Q8N196 739 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 Q8N402 240 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 TMEM145Q8NBT3 493 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 ANKK1Q8NFD2 765 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 FGF11Q92914 225 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 CIDECQ96AQ7 238 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 AP2M1Q96CW1 435 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SCRN2Q96FV2 425 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 QRFPRQ96P65 431 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 FUZQ9BT04 418 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 TMEM43Q9BTV4 400 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 MRPS18AQ9NVS2 196 aaKnown RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 ZSCAN32Q9NX65 697 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 GULP1Q9UBP9 304 aa14.91□□□□□ -0.02
COMMD4-215ENST00000566843 SPIN1Q9Y657 262 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-215ENST00000566843 ARHGEF33A8MVX0 844 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 H7C4K7 107 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PSIP1O75475 530 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 ZNF821O75541 412 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 LATS1O95835 1130 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HMGA1P17096 107 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 FGF9P31371 208 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 RPL3P39023 403 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 OPRD1P41143 372 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 WNT4P56705 351 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 SEMG2Q02383 582 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 NAE1Q13564 534 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 SF3A2Q15428 464 aaKnown RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 WSCD2Q2TBF2 565 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 DCST1Q5T197 706 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 REEP3Q6NUK4 255 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PGBD2Q6P3X8 592 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 AGTRAPQ6RW13 159 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TMIGD1Q6UXZ0 262 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 BPHLQ86WA6 291 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 OR52P1PQ8NH57 321 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TMEM203Q969S6 136 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PPCDCQ96CD2 204 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 NECTIN4Q96NY8 510 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 HMX1Q9NP08 348 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 B3GAT2Q9NPZ5 323 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PAK6Q9NQU5 681 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 STOX2Q9P2F5 926 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PHF11Q9UIL8 331 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TEX51A0A1B0GUA7 166 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 FAM240BA0A1B0GVZ2 78 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 WASHC1A8K0Z3 465 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 SGK494L7N484 410 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 CACNB4O00305 520 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 ORC5O43913 435 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 SLCO2B1O94956 709 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 GAAP10253 952 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 ARSBP15848 533 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 SERPINA4P29622 427 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 PNLIPRP1P54315 467 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 DSTNP60981 165 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 IKZF1Q13422 519 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 FAM71E1Q6IPT2 247 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 CD200R1LQ6Q8B3 271 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 TRILQ7L0X0 811 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 OTOP2Q7RTS6 562 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 C9orf62Q8N4C0 152 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 GPR32P1Q8NGA4 272 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 OR56A3Q8NH54 315 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 OR5AK3PQ8NH89 298 aa14.9□□□□□ -0.02
COMMD4-215ENST00000566843 DNAJA4Q8WW22 397 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-215ENST00000566843 ASIC4Q96FT7 647 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms