RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 WDR41Q9HAD4 459 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 SACM1LQ9NTJ5 587 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 RNF11Q9Y3C5 154 aa18.67■□□□□ 0.58
CLN6-207ENST00000566347 ZNF407Q9C0G0 2248 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 PINLYPA6NC86 204 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 STX16-NPEPL1H3BU86 382 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 STX16O14662 325 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 EEDO75530 441 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 KRT38O76015 456 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 PDE9AO76083 593 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 GPR75O95800 540 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 P04436 131 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 FAM58BPP0C7Q3 252 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 NR2F6P10588 404 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 COL6A2P12110 1019 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 CNTFP26441 200 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 BSGP35613 385 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 ARL1P40616 181 aaPredicted RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 CCNG1P51959 295 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 ASPHQ12797 758 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 C10orf62Q5T681 223 aaPredicted RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 UBAP2Q5T6F2 1119 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 C9orf40Q8IXQ3 194 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 PLD6Q8N2A8 252 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 SLC15A4Q8N697 577 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 CA5BP1Q8WTZ4 195 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 PPWD1Q96BP3 646 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 PAFAH2Q99487 392 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 SERPINI1Q99574 410 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 DEFB127Q9H1M4 99 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 NOL11Q9H8H0 719 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 DMGDHQ9UI17 866 aaKnown RBP18.66■□□□□ 0.58
CLN6-207ENST00000566347 ASB4Q9Y574 426 aa18.66■□□□□ 0.58
CLN6-207ENST00000566347 DNAJC13O75165 2243 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 A0A0G2JMM0 328 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 IQANK1A0A1B0GTG1 560 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 A0A1W2PPB8 328 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 A0A1W2PRS3 328 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 FAM166BA8MTA8 275 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 KIR3DP1A8MWS1 328 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 G3V3Y1 287 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 TMPRSS11DO60235 418 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 OR10H2O60403 315 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 ZNF354AO60765 605 aaPredicted RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 SMIM24O75264 130 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 GLSO94925 669 aaPredicted RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 SEMA3DO95025 777 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 SNRPB2P08579 225 aaKnown RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 TBL3Q12788 808 aaKnown RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 CDSNQ15517 529 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 SPRED3Q2MJR0 410 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 GLE1Q53GS7 698 aaKnown RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 FAM47EQ6ZV65 393 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 DND1Q8IYX4 353 aaKnown RBP18.65■□□□□ 0.58
CLN6-207ENST00000566347 IFT81Q8WYA0 676 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 SDCCAG3Q96C92 435 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 PHF21BQ96EK2 531 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 NTMT1Q9BV86 223 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 CNPPD1Q9BV87 410 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 IL1RL2Q9HB29 575 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 ZNF358Q9NW07 568 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 ADGRG4Q8IZF6 3080 aa18.65■□□□□ 0.58
CLN6-207ENST00000566347 EML6Q6ZMW3 1958 aa18.64■□□□□ 0.58
CLN6-207ENST00000566347 A0A1W2PR48 441 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 OR7A17O14581 309 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 PRKRAO75569 313 aaKnown RBP18.64■□□□□ 0.57
CLN6-207ENST00000566347 GALNSP34059 522 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 NEK2P51955 445 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 FRG2Q64ET8 278 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 DGAT2L6Q6ZPD8 337 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 SLC29A4Q7RTT9 530 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 FAM109AQ8N4B1 249 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 NOA1Q8NC60 698 aaKnown RBP18.64■□□□□ 0.57
CLN6-207ENST00000566347 OR52B6Q8NGF0 335 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 ZNF592Q92610 1267 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 RIT1Q92963 219 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 CDK15Q96Q40 435 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 FRG2BQ96QU4 278 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 XPR1Q9UBH6 696 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 ZNF180Q9UJW8 692 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 PCTPQ9UKL6 214 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 FBN2P35556 2912 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 DCHS2Q6V1P9 2916 aa18.64■□□□□ 0.57
CLN6-207ENST00000566347 OR14I1A6ND48 311 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 OR6C76A6NM76 312 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 C19orf84I3L1E1 186 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 HRKO00198 91 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 CCL3P10147 92 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 HERVK_113P63132 956 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 ERVK-8P63133 956 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 IFT88Q13099 833 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 ZNF267Q14586 743 aaPredicted RBP18.63■□□□□ 0.57
CLN6-207ENST00000566347 HYAL4Q2M3T9 481 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 ZNF791Q3KP31 576 aaPredicted RBP18.63■□□□□ 0.57
CLN6-207ENST00000566347 SLC22A10Q63ZE4 541 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 TTC19Q6DKK2 380 aaPredicted RBP18.63■□□□□ 0.57
CLN6-207ENST00000566347 OR52E8Q6IFG1 317 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 RNF111Q6ZNA4 994 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 TMEM251Q8N6I4 163 aa18.63■□□□□ 0.57
CLN6-207ENST00000566347 ASB5Q8WWX0 329 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms