RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CARD16Q5EG05 197 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FAM102BQ5T8I3 360 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ALKAL1Q6UXT8 129 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMEM135Q86UB9 458 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 LAX1Q8IWV1 398 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 Q8N402 240 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 BVESQ8NE79 360 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SRFBP1Q8NEF9 429 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 OR5J2Q8NH18 312 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CNOT9Q92600 299 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 PPP3R2Q96LZ3 170 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 OR10A4Q9H209 315 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 DDX31Q9H8H2 851 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 PIH1D1Q9NWS0 290 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 FAM120CQ9NX05 1096 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 ING4Q9UNL4 249 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MGAT4BQ9UQ53 548 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 A0A1W2PPC1 479 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GSAPA4D1B5 854 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PRR33A8MZF0 331 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 G3V3Q6 166 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ORC5O43913 435 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TOXO94900 526 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CNPP09543 421 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 PCSK1P29120 753 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ASPAP45381 313 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SLC6A3Q01959 620 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARL6IP1Q15041 203 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 UGCGQ16739 394 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MICBQ29980 383 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PSMG4Q5JS54 123 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZFAND4Q86XD8 727 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 IL17RCQ8NAC3 791 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NANPQ8TBE9 248 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HASPINQ8TF76 798 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 LRRC58Q96CX6 371 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GPR63Q9BZJ6 419 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SDHAF3Q9NRP4 125 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SEC14L4Q9UDX3 406 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 MGAT4AQ9UM21 535 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NT5C1B-RDH14C9J2C7 533 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 F8W036 122 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 M0QYT0 321 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FLRT2O43155 660 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CKMT1AP12532 417 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF35P13682 527 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF14P17017 642 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 CLDN20P56880 219 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZP1P60852 638 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HERVK_113P63132 956 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SPOCK1Q08629 439 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TTLL4Q14679 1199 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 DOK7Q18PE1 504 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 WSCD2Q2TBF2 565 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 PYDC2Q56P42 97 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 C9orf135Q5VTT2 229 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZFP82Q8N141 532 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 STPG2Q8N412 459 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FBXO15Q8NCQ5 510 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 LIPHQ8WWY8 451 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 EDARADDQ8WWZ3 215 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 UPF1Q92900 1129 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHD9-218ENST00000566029 RNFT2Q96EX2 444 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF845Q96IR2 970 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZNF251Q9BRH9 671 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FOLH1BQ9HBA9 442 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RDH8Q9NYR8 311 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ASH2LQ9UBL3 628 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FAM198AQ9UFP1 575 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SCN3AQ9NY46 2000 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CYB5BO43169 146 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 KHDRBS3O75525 346 aaKnown RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 MPC2O95563 127 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GLUD1P00367 558 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SRCP12931 536 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CBR1P16152 277 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 NTF3P20783 257 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HOXA6P31267 233 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ARHGDIBP52566 201 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ACTR1AP61163 376 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 RNF4P78317 190 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GPR68Q15743 365 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 DCAF4L1Q3SXM0 396 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 HSD17B12Q53GQ0 312 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 C1orf189Q5VU69 101 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CLRN3Q8NCR9 226 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TMEM143Q96AN5 459 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ZBTB45Q96K62 511 aaPredicted RBP2.79□□□□□ -1.96
CHD9-218ENST00000566029 CSPG4P5Q96PW8 444 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 TBX5Q99593 518 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 GSX2Q9BZM3 304 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CDHR5Q9HBB8 845 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ERVK13-1Q9NX77 482 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 BABAM2Q9NXR7 383 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 ASIC5Q9NY37 505 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 POMT2Q9UKY4 750 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 LRFN2Q9ULH4 789 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 SHANK3Q9BYB0 1731 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 FGF4P08620 206 aa2.79□□□□□ -1.96
CHD9-218ENST00000566029 CYP2B6P20813 491 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms