RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ACSM2AQ08AH3 577 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 PRR30Q53SZ7 412 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SPIN4Q56A73 249 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SH2D4BQ5SQS7 431 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 HHATQ5VTY9 493 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 ACSM2BQ68CK6 577 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 RNF165Q6ZSG1 346 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 OR4N5Q8IXE1 308 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 LGI4Q8N135 537 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 BEST3Q8N1M1 668 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SUN3Q8TAQ9 357 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 DAZLQ92904 295 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 TM4SF18Q96CE8 201 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 C11orf24Q96F05 449 aaPredicted RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 NPAS2Q99743 824 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 MCM8Q9UJA3 840 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 DNAJC15Q9Y5T4 150 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 PTGDR2Q9Y5Y4 395 aa12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 COPG1Q9Y678 874 aaKnown RBP12.9□□□□□ -0.34
HERPUD1-210ENST00000565966 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 GLOD5A6NK44 160 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 TMEM114B3SHH9 223 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 SLC28A1O00337 649 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 PGRMC2O15173 223 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ITM2AO43736 263 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 PCDH7O60245 1069 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 GUCY1B2O75343 617 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 LYPLA1O75608 230 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 BGNP21810 368 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ABCE1P61221 599 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 TRA2BP62995 288 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 FOLH1Q04609 750 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 IMPG1Q17R60 797 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 SPDYAQ5MJ70 313 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 NDUFAF5Q5TEU4 345 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 GALNT18Q6P9A2 607 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 Q6ZSR9 355 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 GALNT11Q8NCW6 608 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 MORN4Q8NDC4 146 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 MGARPQ8TDB4 240 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 PTPMT1Q8WUK0 201 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 NCLNQ969V3 563 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 UTP23Q9BRU9 249 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 CLMPQ9H6B4 373 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ZNF395Q9H8N7 513 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ASF1BQ9NVP2 202 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 ZDHHC2Q9UIJ5 367 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
HERPUD1-210ENST00000565966 TRBV11-1A0A0K0K1C0 115 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 GABRR3A8MPY1 467 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 C17orf105B2RV13 164 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 RGS14O43566 566 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 MAN1A2O60476 641 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 SASH3O75995 380 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 HSPA4LO95757 839 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 GPR75O95800 540 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 CHEK2O96017 543 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 LINC00032P0C843 101 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 NEFHP12036 1026 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 COX7A2P14406 83 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 PRPH2P23942 346 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 GRK2P25098 689 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 TIA1P31483 386 aaKnown RBP eCLIP12.88□□□□□ -0.359e-7■■■□□ 15.9
HERPUD1-210ENST00000565966 CD96P40200 585 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 STT3AP46977 705 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 MLF1P58340 268 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 OR52E8Q6IFG1 317 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 MMP21Q8N119 569 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 OR2T11Q8NH01 316 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 TWIST2Q8WVJ9 160 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 AGPAT4Q9NRZ5 378 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
HERPUD1-210ENST00000565966 CES1P1Q9UKY3 287 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms