RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GPR143P51810 404 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 PER3P56645 1201 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 HSF1Q00613 529 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 FOLH1Q04609 750 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 RBPJQ06330 500 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 IFT88Q13099 833 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 TNFAIP8L3Q5GJ75 292 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 CEP85LQ5SZL2 805 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 IL20RBQ6UXL0 311 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 HSDL2Q6YN16 418 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF227Q86WZ6 799 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 NUDT13Q86X67 352 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 TRPC4APQ8TEL6 797 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 ASB15Q8WXK1 588 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 SMC6Q96SB8 1091 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 CNPPD1Q9BV87 410 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 C12orf65Q9H3J6 166 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 LYARQ9NX58 379 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-204ENST00000565023 C2CD3Q4AC94 2353 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 A0A1B0GUH1 482 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 G3V3Y1 287 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 CCL21O00585 134 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 SUPT7LO94864 414 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 OR6B1O95007 311 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 OR4F21O95013 312 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 OTCP00480 354 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 STSP08842 583 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 FAM58BPP0C7Q3 252 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 NR2F6P10588 404 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 COX7A2P14406 83 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 CPA3P15088 417 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 CREB1P16220 341 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF24P17028 368 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 TLX1P31314 330 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 SOX3P41225 446 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 DNAJB13P59910 316 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 CLCQ05315 142 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 GGTA1PQ4G0N0 100 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 FRG2Q64ET8 278 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 DGAT2L6Q6ZPD8 337 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 MAMDC2Q7Z304 686 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 MDGA2Q7Z553 956 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 SULF2Q8IWU5 870 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 ZCCHC7Q8N3Z6 543 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 MORN4Q8NDC4 146 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 PGM2Q96G03 612 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 RBM18Q96H35 190 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 FRG2BQ96QU4 278 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 HBEGFQ99075 208 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF717Q9BY31 904 aaPredicted RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 MRPL1Q9BYD6 325 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 IQCGQ9H095 443 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 WDR41Q9HAD4 459 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 FARSBQ9NSD9 589 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 OXSMQ9NWU1 459 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 MS4A12Q9NXJ0 267 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 COPS7AQ9UBW8 275 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF225Q9UK10 706 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 SLC12A4Q9UP95 1085 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 PCDHGB6Q9Y5F9 930 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 FBN2P35556 2912 aa12.66□□□□□ -0.38
VPS9D1-204ENST00000565023 A0A0A6YYD5 115 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 A0A1W2PR48 441 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ASPDHA6ND91 283 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TMEM200CA6NKL6 621 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 HRKO00198 91 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TFECO14948 347 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PROM1O43490 865 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TYROBPO43914 113 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PEX1O43933 1283 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 OR10H2O60403 315 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 CDC40O60508 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 SPAG7O75391 227 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 MLYCDO95822 493 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 AIFM1O95831 613 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 KLK1P06870 262 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ALOX15P16050 662 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 STT3AP46977 705 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 HK2P52789 917 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 NAA20P61599 178 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ERVK-8P63133 956 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 RNF4P78317 190 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 PLIN5Q00G26 463 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 CUL3Q13618 768 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF750Q32MQ0 723 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TCHHL1Q5QJ38 904 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 C10orf62Q5T681 223 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 ZNF787Q6DD87 383 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 LETMD1Q6P1Q0 360 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 CCDC63Q8NA47 563 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 TCP10LQ8TDR4 215 aa12.65□□□□□ -0.38
VPS9D1-204ENST00000565023 SELENOMQ8WWX9 145 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms