RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CLK4Q9HAZ1 481 aaKnown RBP7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NTN4Q9HB63 628 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NEUROD4Q9HD90 331 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC6A20Q9NP91 592 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PRDM8Q9NQV8 689 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 USE1Q9NZ43 259 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ORC6Q9Y5N6 252 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 KNTC1P50748 2209 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TEX15Q9BXT5 2789 aa7.05□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ISM1B1AKI9 464 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RTCAO00442 366 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PLOD2O00469 737 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DLGAP1O14490 977 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 HAT1O14929 419 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SUV39H1O43463 412 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NOBOXO60393 691 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GUCY1B2O75343 617 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FKBP9O95302 570 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PGM3O95394 542 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SNAP29O95721 258 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 IFNA14P01570 189 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SEMG1P04279 462 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ALPLP05186 524 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CHRM5P08912 532 aaPredicted RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PABPC4LP0CB38 370 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ATP6V1B1P15313 513 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CDH2P19022 906 aaPredicted RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FPR1P21462 350 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NTSP30990 170 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DCTP40126 519 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 BCL6P41182 706 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PRIM2P49643 509 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ARHGDIAP52565 204 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ARFIP1P53367 373 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RAD23AP54725 363 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NR1H2P55055 460 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ITGA1P56199 1179 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TGM3Q08188 693 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FOXC1Q12948 553 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SCARB2Q14108 478 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SPIDRQ14159 915 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ELOAQ14241 798 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PROX2Q3B8N5 592 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CYBRD1Q53TN4 286 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TOR1AIP1Q5JTV8 583 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TTC23Q5W5X9 447 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR2T5Q6IEZ7 315 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SHQ1Q6PI26 577 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ISLR2Q6UXK2 745 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 UNQ6494/PRO21346Q6UXR6 183 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PATL1Q86TB9 770 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 AMIGO1Q86WK6 493 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TRIM48Q8IWZ4 208 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ADGRF3Q8IZF5 1079 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZNF786Q8N393 782 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SDR16C5Q8N3Y7 309 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ARL10Q8N8L6 244 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MFSD9Q8NBP5 474 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SRFBP1Q8NEF9 429 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZNF555Q8NEP9 628 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR2L3Q8NG85 312 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR2T29Q8NH02 315 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 IFI44Q8TCB0 444 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PATE1Q8WXA2 126 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR5P2Q8WZ92 322 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 LZICQ8WZA0 190 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TBC1D20Q96BZ9 403 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TM4SF18Q96CE8 201 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FBXL20Q96IG2 436 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 BBC3Q96PG8 261 aaPredicted RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NRTNQ99748 197 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZNF717Q9BY31 904 aaPredicted RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 YTHDF1Q9BYJ9 559 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GRIP2Q9C0E4 1043 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 YIPF3Q9GZM5 350 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DDX31Q9H8H2 851 aaKnown RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR6C2Q9NZP2 312 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SCHIP1Q9P0W5 487 aaPredicted RBP7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 C3orf18Q9UK00 162 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SNX7Q9UNH6 387 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PCDHGB5Q9Y5G0 923 aa7.04□□□□□ -1.28
MAP1LC3B-205ENST00000564638 A0A087WXM4 84 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 A0A0A6YYD5 115 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 IGKV1-8A0A0C4DH67 115 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 LY6G6EA0A0G2JKS1 128 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MYOCOSA0A1B0GUC4 107 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RHPN2P1A8MT19 583 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MYO1GB0I1T2 1018 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 hCG_2039718K7EN88 272 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZW10O43264 779 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ERI3O43414 337 aaKnown RBP7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PRICKLE3O43900 615 aaPredicted RBP7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 HS6ST1O60243 411 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TNFRSF21O75509 655 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RFPL3O75679 317 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 KLHL18O94889 574 aa7.03□□□□□ -1.28
MAP1LC3B-205ENST00000564638 EML2O95834 649 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms