RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PILRBQ9UKJ0 227 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 LRIT2A6NDA9 550 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 RTCAO00442 366 aaKnown RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 GPR37L1O60883 481 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 BSGP35613 385 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 PLIN5Q00G26 463 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 IFITM3Q01628 133 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 BNC1Q01954 994 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 DPY19L1Q2PZI1 675 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 PRMT9Q6P2P2 845 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 OOSP2Q86WS3 158 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 MFSD9Q8NBP5 474 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 TRPV3Q8NET8 790 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 OR7A2PQ8NGA2 310 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 DNAJB14Q8TBM8 379 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 RSC1A1Q92681 617 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 PMEPA1Q969W9 287 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 PPM1MQ96MI6 270 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 BDP1A6H8Y1 2624 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 JUNBP17275 347 aaPredicted RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 TYRP1P17643 537 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 ME2P23368 584 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 KIR3DL1P43629 444 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 LSSP48449 732 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 SRSF11Q05519 484 aaKnown RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 SLC5A12Q1EHB4 618 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 CLVS2Q5SYC1 327 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 FBXO42Q6P3S6 717 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 FIGLAQ6QHK4 219 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 ZNF438Q7Z4V0 828 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 PARP8Q8N3A8 854 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 OR13F1Q8NGS4 319 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 RGMAQ96B86 450 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 OMA1Q96E52 524 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 FCRL4Q96PJ5 515 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 MACROD1Q9BQ69 325 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 REXO4Q9GZR2 422 aaKnown RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 AICDAQ9GZX7 198 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 IFT22Q9H7X7 185 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 LHX9Q9NQ69 397 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 ABCD2Q9UBJ2 740 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 CD300AQ9UGN4 299 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 FBXO4Q9UKT5 387 aa16.78■□□□□ 0.28
GDE1-203ENST00000564172 CAB39Q9Y376 341 aaPredicted RBP16.78■□□□□ 0.28
GDE1-203ENST00000564172 PRORSD1PA6NEY8 169 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 GABRR3A8MPY1 467 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 SCAMP2O15127 329 aaKnown RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 NDUFS4O43181 175 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 NADKO95544 446 aaPredicted RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 COX7A2P14406 83 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 MLLT10P55197 1068 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 RPS15AP62244 130 aaKnown RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 CYP4F3Q08477 520 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 HYAL2Q12891 473 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 DNASE1L3Q13609 305 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 PWP1Q13610 501 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 OR4F3Q6IEY1 312 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 TTC33Q6PID6 262 aaPredicted RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 UBE3DQ7Z6J8 389 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 SLC22A16Q86VW1 577 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 TMEM151BQ8IW70 566 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 SLC25A45Q8N413 288 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 FAM156AQ8NDB6 213 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 OR8J2Q8NGG1 315 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 C16orf78Q8WTQ4 265 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 FIG4Q92562 907 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 ELF4Q99607 663 aaPredicted RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 UCK1Q9HA47 277 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 EVA1BQ9NVM1 165 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 SUSD2Q9UGT4 822 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 MAPRE3Q9UPY8 281 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 EXO1Q9UQ84 846 aaKnown RBP16.77■□□□□ 0.28
GDE1-203ENST00000564172 BTBD3Q9Y2F9 522 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.28
GDE1-203ENST00000564172 CACNA1EQ15878 2313 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 A0A0B4J203 849 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 TRIM38O00635 465 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 NME4O00746 187 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 KCNH1O95259 989 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 CPNE6O95741 557 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 STATHP02808 62 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 TCN1P20061 433 aaPredicted RBP16.77■□□□□ 0.27
GDE1-203ENST00000564172 MYF6P23409 242 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 ETV1P50549 477 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 PPP1CAP62136 330 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 ADPRMQ3LIE5 342 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 SAMD4BQ5PRF9 694 aaKnown RBP16.77■□□□□ 0.27
GDE1-203ENST00000564172 CCNYL2Q5T2Q4 361 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 RSBN1Q5VWQ0 802 aaPredicted RBP16.77■□□□□ 0.27
GDE1-203ENST00000564172 FIP1L1Q6UN15 594 aaKnown RBP16.77■□□□□ 0.27
GDE1-203ENST00000564172 PAGE2Q7Z2X7 111 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.77■□□□□ 0.27
GDE1-203ENST00000564172 TRIM8Q9BZR9 551 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 TRIM15Q9C019 465 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 KLHL31Q9H511 634 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 SERHLQ9NQF3 203 aa16.77■□□□□ 0.27
GDE1-203ENST00000564172 CMTM6Q9NX76 183 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms