RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 VPS33AQ96AX1 596 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 OR52E6Q96RD3 313 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 UBL7Q96S82 380 aaPredicted RBP12.15□□□□□ -0.46
SPG7-209ENST00000564047 SPRY4Q9C004 299 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 TGIF2Q9GZN2 237 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 SLC35C2Q9NQQ7 365 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 SLC22A11Q9NSA0 550 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 FAM120CQ9NX05 1096 aaKnown RBP12.15□□□□□ -0.46
SPG7-209ENST00000564047 TRPC4Q9UBN4 977 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 LEF1Q9UJU2 399 aaPredicted RBP12.15□□□□□ -0.46
SPG7-209ENST00000564047 UTS2RQ9UKP6 389 aa12.15□□□□□ -0.46
SPG7-209ENST00000564047 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.47
SPG7-209ENST00000564047 PRSS51A0A1B0GVH4 220 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 ASPDHA6ND91 283 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 GLOD5A6NK44 160 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 FAM227AF5H4B4 570 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 RNASET2O00584 256 aaKnown RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 FBP2O00757 339 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 CLDN4O14493 209 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 CTNSO60931 367 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 SCN2BO60939 215 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 STK17BO94768 372 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 TNFSF15O95150 251 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 DLGAP3O95886 979 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 ALBP02768 609 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 FHP07954 510 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 FRKP42685 505 aaPredicted RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 HNRNPFP52597 415 aaKnown RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 HSD17B7P56937 341 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 CEBPEQ15744 281 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 MMEL1Q495T6 779 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 OR4F3Q6IEY1 312 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 OVCH1Q7RTY7 1134 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 ZC3H7AQ8IWR0 971 aaKnown RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 SHISA5Q8N114 240 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 TMEM52Q8NDY8 209 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 OR4K14Q8NGD5 310 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 FKBP10Q96AY3 582 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 EXOSC8Q96B26 276 aaKnown RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 YIPF2Q9BWQ6 316 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 SLC26A1Q9H2B4 701 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 RMND5AQ9H871 391 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 LANCL2Q9NS86 450 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 IFT80Q9P2H3 777 aaPredicted RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 ZNF282Q9UDV7 671 aaPredicted RBP12.14□□□□□ -0.47
SPG7-209ENST00000564047 MMACHCQ9Y4U1 282 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
SPG7-209ENST00000564047 WASHC1A8K0Z3 465 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 B2RBV5 119 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 PDPK1O15530 556 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ERAL1O75616 437 aaKnown RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 BMP10O95393 424 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 GPR75O95800 540 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 PCBP4P57723 403 aaKnown RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 GABREP78334 506 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 OCA2Q04671 838 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 MAP7Q14244 749 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 MLC1Q15049 377 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 MPEG1Q2M385 716 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 IGF2-ASQ6U949 168 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ZNF517Q6ZMY9 492 aaPredicted RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 RETREG3Q86VR2 466 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 DPP10Q8N608 796 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 PCYOX1LQ8NBM8 494 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 GALNT6Q8NCL4 622 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 C7orf57Q8NEG2 295 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 DNAJB8Q8NHS0 232 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 GTF2H4Q92759 462 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 RCN3Q96D15 328 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 RNF31Q96EP0 1072 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ITCHQ96J02 903 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ZNF681Q96N22 645 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 CCDC115Q96NT0 180 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 RBCK1Q9BYM8 510 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 DENND2DQ9H6A0 471 aaPredicted RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 DCLRE1BQ9H816 532 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 EFCAB1Q9HAE3 211 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 PRTFDC1Q9NRG1 225 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ACSS1Q9NUB1 689 aaPredicted RBP12.13□□□□□ -0.47
SPG7-209ENST00000564047 C14orf105Q9NVL8 296 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ENTPD4Q9Y227 616 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 PCDHGA7Q9Y5G6 932 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 ATMQ13315 3056 aa12.13□□□□□ -0.47
SPG7-209ENST00000564047 A0A1W2PRB8 838 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 VSTM2BA6NLU5 285 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
SPG7-209ENST00000564047 MRASO14807 208 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms