RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CBLCQ9ULV8 474 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
NME3-204ENST00000563498 CHCHD2Q9Y6H1 151 aaPredicted RBP17.18■□□□□ 0.34
NME3-204ENST00000563498 RTCAO00442 366 aaKnown RBP17.17■□□□□ 0.34
NME3-204ENST00000563498 EPPINO95925 133 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 FBXO45P0C2W1 286 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 FLNAP21333 2647 aaKnown RBP17.17■□□□□ 0.34
NME3-204ENST00000563498 BMP5P22003 454 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 SERPINB3P29508 390 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 TIMP3P35625 211 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 ATP6V0D1P61421 351 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 ADAM8P78325 824 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 PLIN5Q00G26 463 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 IRF8Q02556 426 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 CHIT1Q13231 466 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 PRAMEF20Q5VT98 475 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 PAMR1Q6UXH9 720 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 CHSY3Q70JA7 882 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 MAATS1Q7Z4T9 603 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 LACC1Q8IV20 430 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 ANKMY2Q8IV38 441 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 LAS2Q8IYD9 372 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 LIX1Q8N485 282 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 NAXEQ8NCW5 288 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 TANKQ92844 425 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 ESAMQ96AP7 390 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 TSPAN17Q96FV3 270 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 PHACTR1Q9C0D0 580 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 SLC6A15Q9H2J7 730 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 DMRT3Q9NQL9 472 aa17.17■□□□□ 0.34
NME3-204ENST00000563498 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
NME3-204ENST00000563498 PTBP2Q9UKA9 531 aaKnown RBP17.17■□□□□ 0.34
NME3-204ENST00000563498 ANKRD33BA6NCL7 494 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 DRD2P14416 443 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 SSR2P43308 183 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 ACSF3Q4G176 576 aaPredicted RBP17.16■□□□□ 0.34
NME3-204ENST00000563498 FBXO48Q5FWF7 155 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 TBCELQ5QJ74 424 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 POMZP3Q6PJE2 187 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 LRRC70Q7Z2Q7 622 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 OR4N5Q8IXE1 308 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 SPATA6LQ8N4H0 392 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 FAM13CQ8NE31 585 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 FBXO36Q8NEA4 188 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 OR10G3Q8NGC4 313 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 KRT12Q99456 494 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 GSX1Q9H4S2 264 aaPredicted RBP17.16■□□□□ 0.34
NME3-204ENST00000563498 RPF2Q9H7B2 306 aaKnown RBP17.16■□□□□ 0.34
NME3-204ENST00000563498 CD274Q9NZQ7 290 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 CNOT11Q9UKZ1 510 aaKnown RBP17.16■□□□□ 0.34
NME3-204ENST00000563498 IKBKGQ9Y6K9 419 aa17.16■□□□□ 0.34
NME3-204ENST00000563498 NCKAP5O14513 1909 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 E7ESA3 106 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 HRKO00198 91 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 C1QAP02745 245 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 RAF1P04049 648 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 CCDC166P0CW27 439 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 CD1DP15813 335 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 PCDH1Q08174 1060 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 CRYZQ08257 329 aaKnown RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 PDIA2Q13087 525 aaKnown RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 CBLBQ13191 982 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 SF3B4Q15427 424 aaKnown RBP eCLIP17.15■□□□□ 0.342e-10■■■■■ 29.7
NME3-204ENST00000563498 OR4D1Q15615 310 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 NTRK2Q16620 822 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 SPRED3Q2MJR0 410 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 KHDRBS2Q5VWX1 349 aaKnown RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 MED27Q6P2C8 311 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 DGAT2L6Q6ZPD8 337 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 SLC29A4Q7RTT9 530 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 ST13P4Q8IZP2 240 aaPredicted RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 SLC35F6Q8N357 371 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 TNIP2Q8NFZ5 429 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 PPWD1Q96BP3 646 aaKnown RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 CMTM7Q96FZ5 175 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 PELOQ9BRX2 385 aaKnown RBP17.15■□□□□ 0.34
NME3-204ENST00000563498 DOHHQ9BU89 302 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 CD244Q9BZW8 370 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 PHF11Q9UIL8 331 aa17.15■□□□□ 0.34
NME3-204ENST00000563498 C15orf38-AP3S2A0A0A6YYH1 394 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 IQANK1A0A1B0GTG1 560 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TP73O15350 636 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 CCNT2O60583 730 aaKnown RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 TRIM3O75382 744 aaPredicted RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 SEC31AO94979 1220 aaKnown RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 GOSR1O95249 250 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TGFB1P01137 390 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 IL2RAP01589 272 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 ALOX15P16050 662 aaPredicted RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 TACR1P25103 407 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TLX1P31314 330 aaPredicted RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 TRPC1P48995 793 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 ARFIP1P53367 373 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 DR1Q01658 176 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 TNFRSF17Q02223 184 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 DUSP8Q13202 625 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 SLAMF1Q13291 335 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 FASTKD3Q14CZ7 662 aaKnown RBP17.14■□□□□ 0.33
NME3-204ENST00000563498 DEPDC1Q5TB30 811 aa17.14■□□□□ 0.33
NME3-204ENST00000563498 OR4C11Q6IEV9 310 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms