RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GCNT6Q5T4J0 391 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 GUSBP11Q6P575 273 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SPRED1Q7Z699 444 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM52Q8NDY8 209 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ZFP28Q8NHY6 868 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 UGT2B28Q9BY64 529 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SPRTNQ9H040 489 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-208ENST00000563220 RAD21L1Q9H4I0 556 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ANKHQ9HCJ1 492 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 SLC6A14Q9UN76 642 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ZNF780BQ9Y6R6 833 aa17.01■□□□□ 0.31
COMMD4-208ENST00000563220 ASXL3Q9C0F0 2248 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 DMDP11532 3685 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 FAM227AF5H4B4 570 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 RDH16O75452 317 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 RAP2AP10114 183 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 BMP2P12643 396 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 MPIP34949 423 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 PCGF2P35227 344 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 NR0B2Q15466 257 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 FAM98BQ52LJ0 330 aaKnown RBP17■□□□□ 0.31
COMMD4-208ENST00000563220 LRRC23Q53EV4 343 aaPredicted RBP17■□□□□ 0.31
COMMD4-208ENST00000563220 OR52E8Q6IFG1 317 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 SLC23A3Q6PIS1 610 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 HORMAD2Q8N7B1 307 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 ADCY4Q8NFM4 1077 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 NR1H4Q96RI1 486 aaPredicted RBP17■□□□□ 0.31
COMMD4-208ENST00000563220 NPLQ9BXD5 320 aaPredicted RBP17■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM38AQ9H6F2 299 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 GIMAP4Q9NUV9 329 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 SEMA5BQ9P283 1151 aa17■□□□□ 0.31
COMMD4-208ENST00000563220 A0A0A6YYC8 382 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CPED1A4D0V7 1026 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 I3L1I5 382 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 ARHGAP33O14559 1287 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 YKT6O15498 198 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 PRIM2P49643 509 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CCT8P50990 548 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 XKP51811 444 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CRYBA2P53672 197 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 SHC2P98077 582 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CHRNB3Q05901 458 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 MN1Q10571 1320 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 GPR19Q15760 415 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 PERM1Q5SV97 790 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 BMP8AQ7Z5Y6 402 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 EID2Q8N6I1 236 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 FAM181AQ8N9Y4 354 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 OR4K14Q8NGD5 310 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 OR9A2Q8NGT5 310 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 MAGED4Q96JG8 741 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 VPS13AQ96RL7 3174 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 NUDT22Q9BRQ3 303 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 VCX3BQ9H321 246 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 SERHL2Q9H4I8 314 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 DTNAQ9Y4J8 743 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 HYKKA2RU49 373 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 A8MU76 341 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CHST10O43529 356 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 PNLIPP16233 465 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 AQP1P29972 269 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 HSD11B2P80365 405 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 RBBP4Q09028 425 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 TP53BP2Q13625 1128 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 TNFAIP8L2Q6P589 184 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM107Q6UX40 140 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CEACAM20Q6UY09 585 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 RABEPKQ7Z6M1 372 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 EID3Q8N140 333 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 CARFQ8N187 725 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 ANKFN1Q8N957 763 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 NFKBIDQ8NI38 313 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 SLC47A1Q96FL8 570 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 PYURFQ96I23 114 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 VCXQ9H320 206 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 SMOC1Q9H4F8 434 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 PRDM9Q9NQV7 894 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 ZCCHC3Q9NUD5 404 aaKnown RBP16.99■□□□□ 0.31
COMMD4-208ENST00000563220 AK5Q9Y6K8 562 aa16.99■□□□□ 0.31
COMMD4-208ENST00000563220 EME2A4GXA9 379 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-208ENST00000563220 FITM1A5D6W6 292 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 H3BMH7 237 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 ARAFP10398 606 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 FCGR1AP12314 374 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 AQP4P55087 323 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 RAB38P57729 211 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 DSTNP60981 165 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 ID2Q02363 134 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 SCARB2Q14108 478 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 LTB4RQ15722 352 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 NDUFA9Q16795 377 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 TCTE1Q5JU00 501 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 TMEM64Q6YI46 380 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 CBLL1Q75N03 491 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 TMPRSS9Q7Z410 1059 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 ZC3H7AQ8IWR0 971 aaKnown RBP16.98■□□□□ 0.31
COMMD4-208ENST00000563220 ICA1LQ8NDH6 482 aa16.98■□□□□ 0.31
COMMD4-208ENST00000563220 OR6C4Q8NGE1 309 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms