RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 OR1B1Q8NGR6 318 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 ESAMQ96AP7 390 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 CDHR1Q96JP9 859 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 RUNDC3BQ96NL0 473 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 LIME1Q9H400 295 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 PANK3Q9H999 370 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 TRIM10Q9UDY6 481 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 ZNF346Q9UL40 294 aaKnown RBP4.5□□□□□ -1.69
LINC00557-201ENST00000563184 MRPS2Q9Y399 296 aaKnown RBP4.5□□□□□ -1.69
LINC00557-201ENST00000563184 ABCC9O60706 1549 aa4.5□□□□□ -1.69
LINC00557-201ENST00000563184 YJEFN3A6XGL0 299 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 TMCO5BA8MYB1 307 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 LRP3O75074 770 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 ATP6V1G1O75348 118 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SERPINF2P08697 491 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 TNFRSF4P43489 277 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SLC1A6P48664 564 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 HNRNPFP52597 415 aaKnown RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SRP54P61011 504 aaKnown RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 FASTKQ14296 549 aaKnown RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 CCL14Q16627 93 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 KRTAP27-1Q3LI81 207 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 MUC21Q5SSG8 566 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 NKAIN2Q5VXU1 208 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 ZNF772Q68DY9 489 aaPredicted RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 ETFRF1Q6IPR1 90 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 NUFIP2Q7Z417 695 aaKnown RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SLC47A2Q86VL8 602 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 CHDHQ8NE62 594 aaPredicted RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 TMEM185AQ8NFB2 350 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 OR4F5Q8NH21 305 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 P3H4Q92791 437 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 TAF15Q92804 592 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 RPGRIP1Q96KN7 1286 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 NAP1L3Q99457 506 aaPredicted RBP4.49□□□□□ -1.69
LINC00557-201ENST00000563184 DCTN5Q9BTE1 182 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 HEXA-AS1Q9H8Q6 139 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 JPT2Q9H910 190 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SLC25A19Q9HC21 320 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 GTSE1Q9NYZ3 720 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 TSPAN16Q9UKR8 245 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 SPATA2Q9UM82 520 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 NPC1L1Q9UHC9 1359 aa4.49□□□□□ -1.69
LINC00557-201ENST00000563184 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 A0A0U1RQG5 324 aaPredicted RBP4.48□□□□□ -1.69
LINC00557-201ENST00000563184 SLC9B1P1A6NJY1 282 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 REC8O95072 547 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 SEMA4FO95754 770 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 IGHV3-13P01766 116 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 HCKP08631 526 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 CCDC159P0C7I6 412 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 LMO2P25791 158 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 SHC1P29353 583 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 ALDH3B1P43353 468 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 CASP9P55211 416 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 MS4A2Q01362 244 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 FAM182AQ5T1J6 154 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 C1orf189Q5VU69 101 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 WDR25Q64LD2 544 aaPredicted RBP4.48□□□□□ -1.69
LINC00557-201ENST00000563184 RTL6Q6ICC9 239 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 GTSCR1Q86UQ5 136 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 CATSPER3Q86XQ3 398 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 CCDC71Q8IV32 467 aaPredicted RBP4.48□□□□□ -1.69
LINC00557-201ENST00000563184 ZNF781Q8N8C0 355 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 OR1K1Q8NGR3 316 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 EXOC6Q8TAG9 804 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 CAPNS2Q96L46 248 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 SOSTQ9BQB4 213 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 TEX13AQ9BXU3 409 aaPredicted RBP4.48□□□□□ -1.69
LINC00557-201ENST00000563184 TRPV6Q9H1D0 765 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 NDUFA13Q9P0J0 144 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 IL19Q9UHD0 177 aa4.48□□□□□ -1.69
LINC00557-201ENST00000563184 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.48□□□□□ -1.69
LINC00557-201ENST00000563184 SPAG9O60271 1321 aaKnown RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 KIF7Q2M1P5 1343 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 MEI4A8MW99 385 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 SHISA9B4DS77 424 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 EEF2KO00418 725 aaKnown RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 HPRP00739 348 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 IGHG3P01860 377 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 HOXD4P09016 255 aaPredicted RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 FOSL2P15408 326 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 AHCYP23526 432 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 RIDAP52758 137 aaKnown RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 CCZ1BP86790 482 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 CCZ1P86791 482 aaPredicted RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 FCHO2Q0JRZ9 810 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 GPAT3Q53EU6 434 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 C9orf66Q5T8R8 295 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 CDC42EP5Q6NZY7 148 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 TIPARPQ7Z3E1 657 aaKnown RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 MYPOPQ86VE0 399 aaPredicted RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 SLC22A16Q86VW1 577 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 NEK11Q8NG66 645 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 COG3Q96JB2 828 aa4.47□□□□□ -1.69
LINC00557-201ENST00000563184 SPAG8Q99932 426 aaPredicted RBP4.47□□□□□ -1.69
LINC00557-201ENST00000563184 TRIM6Q9C030 488 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms