RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 BSPRYQ5W0U4 402 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 SLC22A10Q63ZE4 541 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 RGMBQ6NW40 437 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ANGPTL8Q6UXH0 198 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 BAIAP2L2Q6UXY1 529 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 CEP68Q76N32 757 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 BTN2A1Q7KYR7 527 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 APOBEC3FQ8IUX4 373 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 ATP6V1C2Q8NEY4 427 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 GPR150Q8NGU9 434 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ST8SIA2Q92186 375 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 LPPQ93052 612 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 NT5C3BQ969T7 300 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 NTAN1Q96AB6 310 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 FAM120BQ96EK7 910 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 LRRC46Q96FV0 321 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 NARS2Q96I59 477 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 C12orf42Q96LP6 360 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 PPM1MQ96MI6 270 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 FAM193BQ96PV7 902 aaPredicted RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 OR2A7Q96R45 310 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ATOH8Q96SQ7 321 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ZNF382Q96SR6 550 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 LGMNQ99538 433 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 MAGEB5Q9BZ81 275 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 SEMA4CQ9C0C4 833 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ZYG11BQ9C0D3 744 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 BTBD1Q9H0C5 482 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 PORCNQ9H237 461 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 PIGMQ9H3S5 423 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 RNF167Q9H6Y7 350 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 DDX4Q9NQI0 724 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 SNTG1Q9NSN8 517 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 MRPS18AQ9NVS2 196 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 TXNL4BQ9NX01 149 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 RNF186Q9NXI6 227 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ZNF226Q9NYT6 803 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 VAPAQ9P0L0 249 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 SLAMF8Q9P0V8 285 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 METTL1Q9UBP6 276 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 ZNF222Q9UK12 451 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 ACSL6Q9UKU0 697 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 RPL36Q9Y3U8 105 aaKnown RBP6.93□□□□□ -1.3
CDH1-203ENST00000561751 CLCA3PQ9Y6N3 262 aa6.93□□□□□ -1.3
CDH1-203ENST00000561751 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 NAP1L6A6NFF2 107 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ANKRD61A6NGH8 418 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 C5orf52A6NGY3 159 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SLC9B1P1A6NJY1 282 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ARHGEF33A8MVX0 844 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MYO1GB0I1T2 1018 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MCRIP1C9JLW8 97 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SMLR1H3BR10 107 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 L7N2F9 121 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MAN2B1O00754 1011 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 EIF3GO75821 320 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH1-203ENST00000561751 ATG12O94817 140 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CDRT1O95170 752 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SIX3O95343 332 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 RLN2P04090 185 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ACAA1P09110 424 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 LINC00032P0C843 101 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MTHFD2P13995 350 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 RAB3BP20337 219 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PAICSP22234 425 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 FDXRP22570 491 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 AZGP1P25311 298 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 ATP5A1P25705 553 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 S100A11P31949 105 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ATP5C1P36542 298 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 CD79BP40259 229 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SLC1A2P43004 574 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PREPP48147 710 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 FNTBP49356 437 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 HNMTP50135 292 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MTPNP58546 118 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SPEM2Q0P670 501 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 LRRC74AQ0VAA2 488 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PICALMQ13492 652 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MTMR1Q13613 665 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 KRT33BQ14525 404 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 DMC1Q14565 340 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PON3Q15166 354 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MED22Q15528 200 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 OCLNQ16625 522 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SV2CQ496J9 727 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 NOMO2Q5JPE7 1267 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 HECTD3Q5T447 861 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 FAM171A1Q5VUB5 890 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CDC42EP5Q6NZY7 148 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CNIH2Q6PI25 160 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MOB2Q70IA6 237 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms