RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 LYPD8Q6UX82 237 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 RGS9BPQ6ZS82 235 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 CHSY3Q70JA7 882 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 CCDC25Q86WR0 208 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 TEX9Q8N6V9 391 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 FBXO25Q8TCJ0 367 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 KCTD4Q8WVF5 259 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 UCN3Q969E3 161 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 UBE2E3Q969T4 207 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 CMTM7Q96FZ5 175 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 SGCZQ96LD1 299 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 DGAT2Q96PD7 388 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 MTERF1Q99551 399 aaKnown RBP10.74□□□□□ -0.69
USP3-220ENST00000561381 TTYH2Q9BSA4 534 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 CNPPD1Q9BV87 410 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 RPF2Q9H7B2 306 aaKnown RBP10.74□□□□□ -0.69
USP3-220ENST00000561381 NMRAL1Q9HBL8 299 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 SH2D2AQ9NP31 389 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 KCNJ16Q9NPI9 418 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 SACM1LQ9NTJ5 587 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 COPS7AQ9UBW8 275 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 SPACA6W5XKT8 324 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 CELSR1Q9NYQ6 3014 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 NCKAP5O14513 1909 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 TACC2O95359 2948 aa10.74□□□□□ -0.69
USP3-220ENST00000561381 NINQ8N4C6 2090 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 SPG11Q96JI7 2443 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 A0A1B0GVC2 190 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 OR14I1A6ND48 311 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 BCKDKO14874 412 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 EEDO75530 441 aaKnown RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 LRATO95237 230 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 GSTA2P09210 222 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 RFPL3SP0C7P2 107 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 GLI4P10075 376 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 COX7A2P14406 83 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 MAGEA4P43358 317 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 RAP1GDS1P52306 607 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 MPEG1Q2M385 716 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 HYAL4Q2M3T9 481 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 ZDHHC24Q6UX98 284 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 ACAD11Q709F0 780 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 TBC1D1Q86TI0 1168 aaPredicted RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 GPR180Q86V85 440 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 MYLK4Q86YV6 388 aaPredicted RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 LIX1LQ8IVB5 337 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 DMRTC2Q8IXT2 367 aaPredicted RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 CENPLQ8N0S6 344 aaPredicted RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 OR10Q1Q8NGQ4 319 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 NUBPLQ8TB37 319 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 RGMAQ96B86 450 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 ZNF717Q9BY31 904 aaPredicted RBP10.73□□□□□ -0.69
USP3-220ENST00000561381 PROK2Q9HC23 129 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 DMRT3Q9NQL9 472 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 SPRR3Q9UBC9 169 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 HIVEP1P15822 2718 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 C2CD3Q4AC94 2353 aa10.73□□□□□ -0.69
USP3-220ENST00000561381 A0A0G2JNJ9 132 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 A0A1W2PR48 441 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 A0A1W2PS29 197 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 HMX2A2RU54 273 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 LRRC3CA6NJW4 275 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 FIGNL2A6NMB9 653 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 AQP7O14520 342 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 TMPRSS11DO60235 418 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 HOXD4P09016 255 aaPredicted RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 ALOX15P16050 662 aaPredicted RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 EPB42P16452 691 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 CRABP2P29373 138 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 SERPINB1P30740 379 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ADH7P40394 386 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 MAN2A2P49641 1150 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 RPS13P62277 151 aaKnown RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 HERVK_113P63132 956 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ERVK-8P63133 956 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 PLIN5Q00G26 463 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 TNFRSF17Q02223 184 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ZNF267Q14586 743 aaPredicted RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 SLC10A1Q14973 349 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 SETDB1Q15047 1291 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 PFKFB4Q16877 469 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 SLC22A10Q63ZE4 541 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 B3GNT6Q6ZMB0 384 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 OR10G3Q8NGC4 313 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 NRGNQ92686 78 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 MRRFQ96E11 262 aaKnown RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 SPACA9Q96E40 222 aaPredicted RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 FBXL20Q96IG2 436 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 GAL3ST4Q96RP7 486 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ERVK-6Q9BXR3 956 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 LDAHQ9H6V9 325 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 EXO5Q9H790 373 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ALKBH4Q9NXW9 302 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 Q9UFV3 132 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms