RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 EHD3Q9NZN3 535 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 SH3BP4Q9P0V3 963 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 C19orf25Q9UFG5 118 aaPredicted RBP9.63□□□□□ -0.87
LRRC28-221ENST00000561276 UTS2RQ9UKP6 389 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 G3BP2Q9UN86 482 aaKnown RBP9.63□□□□□ -0.87
LRRC28-221ENST00000561276 GPR45Q9Y5Y3 372 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 ZNF780BQ9Y6R6 833 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 DMXL2Q8TDJ6 3036 aa9.63□□□□□ -0.87
LRRC28-221ENST00000561276 IGHV1-45A0A0A0MS14 117 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 A0A1W2PS29 197 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 E9PBE3 544 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 MASP2O00187 686 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 KLHL41O60662 606 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 SLC35E2P0CK97 266 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 COX6A1P12074 109 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 PORP16435 677 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 PCSK2P16519 638 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 TNNI3P19429 210 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 CSNK2A2P19784 350 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 PRPS1L1P21108 318 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 FEN1P39748 380 aaKnown RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ARFIP2P53365 341 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 CXADRP78310 365 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 EEF1A2Q05639 463 aaKnown RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ATP1A4Q13733 1029 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 DEFB109BQ30KR1 87 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ANKRD26P1Q6NSI1 321 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 DGAT2L6Q6ZPD8 337 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 NDUFAF7Q7L592 441 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 MRGPREQ86SM8 312 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 RIMKLAQ8IXN7 391 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 FAM9CQ8IZT9 166 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 KRTCAP2Q8N6L1 136 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 AMER2Q8N7J2 671 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 OR7A2PQ8NGA2 310 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 MTERF3Q96E29 417 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 CNRIP1Q96F85 164 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 MARK4Q96L34 752 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ZNF681Q96N22 645 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 PRPF18Q99633 342 aaKnown RBP9.62□□□□□ -0.87
LRRC28-221ENST00000561276 LPAR4Q99677 370 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 TMEM120AQ9BXJ8 343 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 DPY30Q9C005 99 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ZNF700Q9H0M5 742 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 SLC35C2Q9NQQ7 365 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 AIG1Q9NVV5 245 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 KLHL14Q9P2G3 628 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 ATP6V1HQ9UI12 483 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 POLHQ9Y253 713 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 CLCA3PQ9Y6N3 262 aa9.62□□□□□ -0.87
LRRC28-221ENST00000561276 URB1O60287 2271 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 NSG1A0A0A6YYJ2 146 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 A0A1W2PQ72 361 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 C17orf105B2RV13 164 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ANKRD28O15084 1053 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 SCAMP2O15127 329 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 TBX19O60806 448 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 HPP00738 406 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 CPMP14384 443 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 IDO1P14902 403 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 NCF2P19878 526 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 MPIP34949 423 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 RPL3P39023 403 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 STT3AP46977 705 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 NME5P56597 212 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 UFM1P61960 85 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 DUSP2Q05923 314 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PDE7AQ13946 482 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ELAVL1Q15717 326 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 GSTA3Q16772 222 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PGS1Q32NB8 556 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 CPTPQ5TA50 214 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 METTL21CQ5VZV1 264 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 R3HCC1LQ7Z5L2 792 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 SAMD14Q8IZD0 417 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ST13P4Q8IZP2 240 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 TMEM102Q8N9M5 508 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PTPMT1Q8WUK0 201 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 SNRNP27Q8WVK2 155 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 STON2Q8WXE9 905 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 RIT1Q92963 219 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 PPCDCQ96CD2 204 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 COQ8BQ96D53 544 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 FER1L6-AS2Q96M78 137 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 CATSPER2Q96P56 530 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 DGAT2Q96PD7 388 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 BBS4Q96RK4 519 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ELAC2Q9BQ52 826 aaKnown RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 WDR77Q9BQA1 342 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-221ENST00000561276 TUBB6Q9BUF5 446 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 BRINP2Q9C0B6 783 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 FAM107BQ9H098 131 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ZNF160Q9HCG1 818 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ADAP2Q9NPF8 381 aa9.61□□□□□ -0.87
LRRC28-221ENST00000561276 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms