RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 TCP11X1B4DZS4 312 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 PDPK1O15530 556 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 TMPRSS11DO60235 418 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 COQ9O75208 318 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SASH3O75995 380 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SLITRK5O94991 958 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 LRATO95237 230 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 FAM87AP0C7U9 286 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 PRR35P0CG20 571 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 PRPH2P23942 346 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 GALNSP34059 522 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 FEN1P39748 380 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
TPM1-229ENST00000561242 HNRNPH2P55795 449 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 SLC26A5P58743 744 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 ERVK-8P63133 956 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 TP53BP2Q13625 1128 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 MPP2Q14168 576 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 ANXA8L1Q5VT79 327 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 MRM1Q6IN84 353 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 TCTN3Q6NUS6 607 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SLC48A1Q6P1K1 146 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 GALNT18Q6P9A2 607 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 LINC00696Q6ZRV3 163 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 FAM47EQ6ZV65 393 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 RPS19BP1Q86WX3 136 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 TICAM1Q8IUC6 712 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 LRRC34Q8IZ02 419 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 DNAJB14Q8TBM8 379 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SLC22A8Q8TCC7 542 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 CKAP2Q8WWK9 683 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 GFM2Q969S9 779 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 MTERF3Q96E29 417 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 DTNBP1Q96EV8 351 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 ABHD17AQ96GS6 310 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 C5orf34Q96MH7 638 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 C7orf26Q96N11 449 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 CSF3RQ99062 836 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 UTP23Q9BRU9 249 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 C1orf50Q9BV19 199 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 REEP4Q9H6H4 257 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SYNPO2LQ9H987 977 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 MMP25Q9NPA2 562 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 MYNNQ9NPC7 610 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SLC35C2Q9NQQ7 365 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 SIRT5Q9NXA8 310 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 SSUH2Q9Y2M2 353 aa10.03□□□□□ -0.8
TPM1-229ENST00000561242 PCDHGA9Q9Y5G4 932 aaKnown RBP10.03□□□□□ -0.8
TPM1-229ENST00000561242 MYOCOSA0A1B0GUC4 107 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 OR2W5A6NFC9 320 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 OR6C76A6NM76 312 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 LSM1O15116 133 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 PGRMC2O15173 223 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 UBDO15205 165 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CNOT3O75175 753 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 FURINP09958 794 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 COX6A1P12074 109 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CPMP14384 443 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 IDO1P14902 403 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CD46P15529 392 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 WT1P19544 449 aaPredicted RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 ANXA11P50995 505 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 LRRC74AQ0VAA2 488 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 RFTN2Q52LD8 501 aaPredicted RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 C6orf136Q5SQH8 315 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 SIRT6Q8N6T7 355 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 OR7G1Q8NGA0 311 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 ADAMTS17Q8TE56 1095 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 ASB15Q8WXK1 588 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 SLC39A7Q92504 469 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 NCLNQ969V3 563 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 PPWD1Q96BP3 646 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 GAL3ST4Q96RP7 486 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CDCP1Q9H5V8 836 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 CACYBPQ9HB71 228 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 DDX18Q9NVP1 670 aaKnown RBP10.02□□□□□ -0.81
TPM1-229ENST00000561242 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 PTPRBP23467 1997 aa10.02□□□□□ -0.81
TPM1-229ENST00000561242 C2orf92A0A1B0GVN3 265 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 A8MVJ9 347 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 HS6ST1O60243 411 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 FGF17O60258 216 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 DNAJB6O75190 326 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 ANP32DO95626 131 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 BCKDHAP12694 445 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 NCF2P19878 526 aaPredicted RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 S100A3P33764 101 aa10.01□□□□□ -0.81
TPM1-229ENST00000561242 TMED10P49755 219 aaKnown RBP10.01□□□□□ -0.81
TPM1-229ENST00000561242 CLK3P49761 638 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms