RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 IFNA14P01570 189 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 FHP07954 510 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF26P17031 533 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 MAGEA2P43356 314 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 RAB38P57729 211 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 SNRPNP63162 240 aaKnown RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 HSD11B2P80365 405 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 PRR5P85299 388 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 CDK6Q00534 326 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 DEFB110Q30KQ9 67 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 LRRC23Q53EV4 343 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 TMTC4Q5T4D3 741 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 NKAIN2Q5VXU1 208 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 PPP4R4Q6NUP7 873 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 CEACAM20Q6UY09 585 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 PRSS42Q7Z5A4 293 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 CCDC116Q8IYX3 515 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 CA13Q8N1Q1 262 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 LRRC25Q8N386 305 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 FAM86B1Q8N7N1 296 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 MIPOL1Q8TD10 442 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 C3orf14Q9HBI5 128 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 SOHLH2Q9NX45 425 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 ADPRHL2Q9NX46 363 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 NTMQ9P121 344 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 DNAJB9Q9UBS3 223 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 V9GYQ6 96 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 NUP214P35658 2090 aaPredicted RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 WASHC1A8K0Z3 465 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 CYR61O00622 381 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 TOX3O15405 576 aaPredicted RBP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 EMC8O43402 210 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 B4GALT2O60909 372 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 SLITRK5O94991 958 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 CFIP05156 583 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 MSL3P1P0C860 447 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 CD1CP29017 333 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 FEN1P39748 380 aaKnown RBP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 KHKP50053 298 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 XKP51811 444 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 AQP4P55087 323 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 NKG7Q16617 165 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 CRB2Q5IJ48 1285 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 SWT1Q5T5J6 900 aaKnown RBP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 ZBTB49Q6ZSB9 765 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 BMP8AQ7Z5Y6 402 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 SPRED1Q7Z699 444 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 PATL1Q86TB9 770 aaKnown RBP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 MAL2Q969L2 176 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 SLC35G5Q96KT7 338 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF570Q96NI8 536 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 Q9H521 79 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 COQ10BQ9H8M1 238 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 ZCCHC3Q9NUD5 404 aaKnown RBP16.13■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF639Q9UID6 485 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 RAB26Q9ULW5 256 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 SLC6A14Q9UN76 642 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 KNL1Q8NG31 2342 aa16.13■□□□□ 0.17
HDDC3-206ENST00000561036 HYKKA2RU49 373 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 TMEM247A6NEH6 219 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 PLOD2O00469 737 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 SUV39H1O43463 412 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 NSA2O95478 260 aaKnown RBP16.12■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF682O95780 498 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 GPR75O95800 540 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 CER1O95813 267 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 SEMG1P04279 462 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 UQCRBP14927 111 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 PPP2R1BP30154 601 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 ARL4DP49703 201 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 PCBP3P57721 371 aaKnown RBP16.12■□□□□ 0.17
HDDC3-206ENST00000561036 TP53BP2Q13625 1128 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 GRM7Q14831 915 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 MYBPC3Q14896 1274 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 CYBRD1Q53TN4 286 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 REEP3Q6NUK4 255 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 SLC23A3Q6PIS1 610 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 PRSS41Q7RTY9 318 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 ZC3H7AQ8IWR0 971 aaKnown RBP16.12■□□□□ 0.17
HDDC3-206ENST00000561036 HORMAD2Q8N7B1 307 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 TTC29Q8NA56 475 aaPredicted RBP16.12■□□□□ 0.17
HDDC3-206ENST00000561036 NFKBIDQ8NI38 313 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 N4BP2L2Q92802 583 aaPredicted RBP16.12■□□□□ 0.17
HDDC3-206ENST00000561036 CCDC74AQ96AQ1 378 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 TBC1D20Q96BZ9 403 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 ELP4Q96EB1 424 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 CSF3RQ99062 836 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 GAREM1Q9H706 876 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 IL1RAPQ9NPH3 570 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 STARD5Q9NSY2 213 aa16.12■□□□□ 0.17
HDDC3-206ENST00000561036 FAM149AA5PLN7 773 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 ZNF860A6NHJ4 632 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 C5orf58C9J3I9 102 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 SGK494L7N484 410 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 DNAJB6O75190 326 aa16.11■□□□□ 0.17
HDDC3-206ENST00000561036 GCM2O75603 506 aaPredicted RBP16.11■□□□□ 0.17
HDDC3-206ENST00000561036 RASAL1O95294 804 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms