RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 RECQL5O94762 991 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 B3GAT3O94766 335 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SCELO95171 688 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 VNN2O95498 520 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 OTCP00480 354 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CGAP01215 116 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CHRNA1P02708 482 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 MT-ND1P03886 318 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 EIF2S1P05198 315 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 CAPN1P07384 714 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PRSS56P0CW18 603 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CTSAP10619 480 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 G6PDP11413 515 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CYBAP13498 195 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 EFNA1P20827 205 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 AGXTP21549 392 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PRPH2P23942 346 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 EEF1B2P24534 225 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 CST5P28325 142 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 PTPN6P29350 595 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CD40LGP29965 261 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 AKT1P31749 480 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 KRT20P35900 424 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TGFBR2P37173 567 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 EIF2DP41214 584 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 HALP42357 657 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 MTHFRP42898 656 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PTGER3P43115 390 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RGRP47804 291 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TTPAP49638 278 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 AGTR2P50052 363 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PSMD7P51665 324 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 LIMK1P53667 647 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RAD23AP54725 363 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 MTPNP58546 118 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CXCR4P61073 352 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 ISL1P61371 349 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RPL38P63173 70 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 FKBP1BP68106 108 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SLC35A2P78381 396 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GNA12Q03113 381 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TLE1Q04724 770 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 YWHAHQ04917 246 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 CHRNB3Q05901 458 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CDC20Q12834 499 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TRAF2Q12933 501 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 MTAPQ13126 283 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 FADDQ13158 208 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 MAD2L1Q13257 205 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 BFSP2Q13515 415 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 BOP1Q14137 746 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 KEAP1Q14145 624 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GALNT3Q14435 633 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GBX1Q14549 363 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PTPRCAPQ14761 206 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 NFATC4Q14934 902 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RPS6KA2Q15349 733 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TBCEQ15813 527 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 RBBP7Q16576 425 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 NFE2Q16621 373 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 TRIM16LQ309B1 348 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TTLL9Q3SXZ7 439 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SLC39A12Q504Y0 691 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RUNDC3AQ59EK9 446 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CDKL4Q5MAI5 379 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SYT6Q5T7P8 510 aaPredicted RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 UBE2UQ5VVX9 321 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RAP1GAP2Q684P5 730 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 KDM4DQ6B0I6 523 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GLYATQ6IB77 296 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TTC23LQ6PF05 361 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 C16orf87Q6PH81 154 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SHQ1Q6PI26 577 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SUSD1Q6UWL2 747 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 FRA10AC1Q70Z53 315 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CHST9Q7L1S5 443 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 KDELC2Q7Z4H8 507 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GLT6D1Q7Z4J2 308 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SNX20Q7Z614 316 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 NECAB2Q7Z6G3 386 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 TMEM179BQ7Z7N9 219 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 DPP9Q86TI2 863 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 P2RY8Q86VZ1 359 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 IFNEQ86WN2 208 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 GPSM1Q86YR5 675 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 HIPK1Q86Z02 1210 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 LACC1Q8IV20 430 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 RASGRP3Q8IV61 690 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 PIANPQ8IYJ0 282 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 LGI2Q8N0V4 545 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 EID3Q8N140 333 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 CLEC4FQ8N1N0 589 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 THEM5Q8N1Q8 247 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SCAIQ8N9R8 606 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 FNDC5Q8NAU1 212 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 SIDT2Q8NBJ9 832 aaKnown RBP2.36□□□□□ -2.03
SPG11-223ENST00000560858 SETD9Q8NE22 299 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 KLHDC9Q8NEP7 349 aa2.36□□□□□ -2.03
SPG11-223ENST00000560858 BPIFB6Q8NFQ5 453 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms